NNNNTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCACCTGATGAATACCCGACAGCTGAGAAGCACCTGAAA
AATGTTCAATATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCTTG
AGATTCCACCTCACACCATCAGAATGACTAGAATCAAAAATTCAGGTGAC
AGCAGATGCTGGTGACGATGTGGAGAAAGAGGAATACTCCTCCATTGCTC
GTGGGATTGCAAGCTGGTACAAGCACTCTGGAAATCGGTCTCGTGTTTCC
TCAGAAGACTGGACATAGTATTACCGCTAGATCCAGCAATATCTCCCCTG
GGCATATACCCAGAAGATGTTCCAACTGGTAATAAGGACACATGCTCCAC
TATGTTCATAGCAACCCTATTTATAATAGCCAGAAGCTGGAAAGAACCCA
GATATTCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATATACACA
ATGGAGTATTACTCAGCTATTAAAATAATGAATTTATGAAATTCTTGCGC
AAATGGATGTATCTGGAGGATATCATCCTGAGTGAGGTAACCCAATCACC
AAAGTAGTCACTTGATACACACTCACTGATAAATGGGTATTAGCCCAGAA
ACCTAGAATACCCACGAATACACTTATAAACCCAGGAAAATCTGAAGGAA
GACCACCGGAGGGAAACTTCCTTCCTCCCTAAATTAAGGGAAAAAAAATT
CCTAAAAGGGAATGGCCGA

NNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATTGAAAAGGAAAGAGGCAC
AGCCCTAGAAGCACAGGCAGTGTTGGGAGGATCTGCAATCCCAACAATGT
AAAACATCTTTTTTTTCTTTTCCTTTTTTAAATAACATTTTAGAAATTAA
ATTACCAACCAGTATAAAGTTGTACTTTAGAATGAGTGGATCAGACACAG
TCACTTAGGTAAGCTTCTATCCTAAAAATATGAAGTTTGGTGCCTCCCAA
ATCTCTTGGGTTTTATCCTATTAGTTTAGATTTATGGTCATTTGACTTAA
ATTTATACAATTCTTGTAAGAAGCTCCAGTTAAAACCAGCAGGTGCTGAC
AGTATCTTATCTTTGTGCATCGAATAAAGTTATGGGTATTGTAAGCACAG
CTTTCTTGGTGGTATTCATTTATGCATGAACAGCCCACTCGATGCCTCTA
AGTACCACATTTTGCTGTTCCTCCCATCCAAAAGCATTTCTGGAATCCTC
TTAACAGCATAAACAGACTTCTTGGCTGTGGGGACAGGTAAAGAAGACAT
TCTAAGCACGGGTGAAAGGATGGTTGTAATGCGTTTCCTAGTGATAAACA
GTATTGCCACCTGATAAAAATGGATGAGTATGAAATGATTTATTTCCTAA
AAAAATTTGGGAGGGTTATTAACGGAGGGGAATTGTTAAAATCATTCCTG
CCCACCGGAAG

Query= MSMg01no427_h09.g1 MSMg01no427_h09.g1 CHROMAT_FILE:
MSMg01no427_h09.g1 PHD_FILE: MSMg01no427_h09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:49:21 2005
         (497 letters)



>mm_chr5_86126185_86127085
          Length = 901

 Score =  922 bits (477), Expect = 0.0
 Identities = 489/495 (98%), Gaps = 4/495 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaaaaggaaagaggcacagccctagaagcacaggcagtgttgggaggatctgcaatccca 63
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 698 gaaaaggaaagaggcacagccctagaagcacaggcagtgttgggaggatctgcaatacca 639

                                                                       
Query: 64  acaatgtaaaacatctttttttt----cttttccttttttaaataacattttagaaatta 119
           |||||||||||||||||||||||    |||||||||||||||||||||||||||||||||
Sbjct: 638 acaatgtaaaacatctttttttttttccttttccttttttaaataacattttagaaatta 579

                                                                       
Query: 120 aattaccaaccagtataaagttgtactttagaatgagtggatcagacacagtcacttagg 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 aattaccaaccagtataaagttgtactttagaatgagtggatcagacacagtcacttagg 519

                                                                       
Query: 180 taagcttctatcctaaaaatatgaagtttggtgcctcccaaatctcttgggttttatcct 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 taagcttctatcctaaaaatatgaagtttggtgcctcccaaatctcttgggttttatcct 459

                                                                       
Query: 240 attagtttagatttatggtcatttgacttaaatttatacaattcttgtaagaagctccag 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 attagtttagatttatggtcatttgacttaaatttatacaattcttgtaagaagctccag 399

                                                                       
Query: 300 ttaaaaccagcaggtgctgacagtatcttatctttgtgcatcgaataaagttatgggtat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 ttaaaaccagcaggtgctgacagtatcttatctttgtgcatcgaataaagttatgggtat 339

                                                                       
Query: 360 tgtaagcacagctttcttggtggtattcatttatgcatgaacagcccactcgatgcctct 419
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 338 tgtaagcacagctttcttggtggtattcatttatgcatgaacagtccactcgatgcctct 279

                                                                       
Query: 420 aagtaccacattttgctgttcctcccatccaaaagcatttctggaatcctcttaacagca 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 aagtaccacattttgctgttcctcccatccaaaagcatttctggaatcctcttaacagca 219

                          
Query: 480 taaacagacttcttg 494
           |||||||||||||||
Sbjct: 218 taaacagacttcttg 204


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 901
Length adjustment: 10
Effective length of query: 487
Effective length of database: 891
Effective search space:   433917
Effective search space used:   433917
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)