Query= MSMg01no428_i16.b1 MSMg01no428_i16.b1 CHROMAT_FILE:
MSMg01no428_i16.b1 PHD_FILE: MSMg01no428_i16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:45 2005
(182 letters)
>mm_chr5_44416816_44417396
Length = 581
Score = 284 bits (147), Expect = 2e-81
Identities = 171/183 (93%), Gaps = 11/183 (6%)
Strand = Plus / Plus
Query: 1 ctatacagagaaaccctggtctggaaaaaccattaaaaaaaaaaaaaaaaaagaatactt 60
|||||||||||||||||| |||||||||||||||||||||||||| ||||||||
Sbjct: 209 ctatacagagaaaccctg-tctggaaaaaccattaaaaaaaaaaa-------gaatactt 260
Query: 61 tttagacatatctacattaatgttaatgaaggtacatgatactagagcctgtttt-gggt 119
|| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 tt-agacatatctacattaatgttaatgaaggtacatgatactagagcctgtttttgggg 319
Query: 120 ggggacatacttagaaacacagagtatgaaaaaacctgatttgaatctgtgtttaaagag 179
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gggg-catacttagaaacacagagtatgaaaaaacctgatttgaatctgtgtttaaagag 378
Query: 180 aca 182
|||
Sbjct: 379 aca 381
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 182
Length of database: 581
Length adjustment: 8
Effective length of query: 174
Effective length of database: 573
Effective search space: 99702
Effective search space used: 99702
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no428_i16.g1 MSMg01no428_i16.g1 CHROMAT_FILE:
MSMg01no428_i16.g1 PHD_FILE: MSMg01no428_i16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:45 2005
(237 letters)
>mm_chr5_44569630_44570266
Length = 637
Score = 451 bits (233), Expect = e-131
Identities = 236/237 (99%)
Strand = Plus / Minus
Query: 1 ttcctggtaaatcactgctcagccaaggtcagtggtgcttagtgatggtttccttctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttcctggtaaatcactgctcagccaaggtcagtggtgcttagtgatggtttccttctact 378
Query: 61 tcactctgggtcctttacgttctaggacagatacacctgacccagcactgttattccatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tcactctgggtcctttacgttctaggacagatacacctgacccagcactgttattccatt 318
Query: 121 tgctaatgcactgttctgtaggacctattacatgtcgggaccatgggatataatgggggg 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tgctaatgcactgtcctgtaggacctattacatgtcgggaccatgggatataatgggggg 258
Query: 181 agaaaagggccttgtccctgctctggtaaacctgatgtgatctgttggggagagggg 237
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 agaaaagggccttgtccctgctctggtaaacctgatgtgatctgttggggagagggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
