NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXATCCGAGAGGAGGCGC
GGAATTCTTGTATTTCCTACACAAGAACACATCAAAATGATGATCCATCA
TGATTAAGTAGGCTTCATCTCAGGGATGCAGGGATGGTTCAATATATGCA
AATCCTTCAAAGTACTCCACTATATAAAAAAAAACGAAGAAACAAAAAGA
AAAAACAACACATGATCATTTTATTAGATGCTGAGAAAGCATTTGACAAA
ATTCAACATCCCTTCATAATAAAATTTTGGAAATATGAGGATTTAAAGGC
CCATATCTAAACCTAGTAATATTAATATTCAGCAAACCAATAGCCAACTT
CAAATAAATGCAGATAAACTTGAAGCAATTCCACTAAAATCAGAGACCAA
ACAAGGCTGCACACACTTTCCCTCCCTGTTCAATATAGTACTCAAAGTCC
TAGCCAGAGCAATCTGATAACAAAGGAGGTAAAAATGATAAGTTGGAAAG
GAAGAAGTCAAAATATCACTACTTGCTGATGATATGAAAGTATATGTAAG
TGACCCCAAAAACTCCACCAGAGAATTCCTAAACCTGATAACTGACTTCT
GTAAAGTGGCTGGATATAAAATTAATGCAAACACATCAGTGGCCTTCCTC
TACTTAAAGAATTAGCAAGCTGAAAAGGAAATTAGGGAAACAACACATTT
CACAATAGCCACAAATAATATAAAATATCTTGGTGTGACT

TCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAGGATCCAGAAGGGCTATTC
TAGCTGTATCTAGCTGTATAGAATTTTACTATCTTCACAGAATTTGGAGA
GCACAAGTGTTTTTCTGACTAACTAATCAATCAATATGTGTGATGTGTTT
TAATTCACAGTAGTAAAGTGATTAAAATACCATGAAGAGAAATATAGAAT
TAGGAAAACCAAAGTCTTGGTGTCAAAAATGCTTTGTAAATTATGTTCTG
GTAAATACTTAGAATAATACTGTCTAATTCTGGAGAAATTATATTACCAT
TGATGTGTTATCATTTACCAAATGTGTATTAAGAATATGCTGGAAATTAC
TATAAAATATTGTTCTAGAAAAATTAGTCAGTACTTACATTCAGAGAGAA
TGGGACTGGAAATATCAGGGAGATGTTTCCTGGTGTCTTCTACAAGTAAC
CTAATAAGTAAAAATACATAATATGAAACATTTCTTGATCATCAAGTACC
CATATTTCAAAAGCCATTTACATGGTACTTAAAAATAACCATAATACCCA
AACTTATGGTCCTGGGAATAGAATAAATCTGTTCTCTACCAGAAATTGAA
AATATTCAGCTTATCTAGTTATTTAAAGTAATGAATCAGGTTTTTGTTTT
GATTTTAAATCACACCAACCTTCCACTTGGGGAATCCTATTTTATCTC

Query= MSMg01no428_k03.g1 MSMg01no428_k03.g1 CHROMAT_FILE:
MSMg01no428_k03.g1 PHD_FILE: MSMg01no428_k03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:52 2005
         (630 letters)



>mm_chr5_60140358_60141387
          Length = 1030

 Score = 1164 bits (602), Expect = 0.0
 Identities = 623/630 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   agaggatccagaagggctattctagctgtatctagctgtatagaattttactatcttcac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaggatccagaagggctattctagctgtatctagctgtatagaattttactatcttcac 260

                                                                       
Query: 61  agaatttggagagcacaagtgtttttctgactaactaatcaatcaatatgtgtgatgtgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agaatttggagagcacaagtgtttttctgactaactaatcaatcaatatgtgtgatgtgt 320

                                                                       
Query: 121 tttaattcacagtagtaaagtgattaaaataccatgaagagaaatatagaattaggaaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaattcacagtagtaaagtgattaaaataccatgaagagaaatatagaattaggaaaa 380

                                                                       
Query: 181 ccaaagtcttggtgtcaaaaatgctttgtaaattatgttctggtaaatacttagaataat 240
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 ccaaagtcttggtgtcaaaaatgctttgtaaattatgttccggtaaatacttagaataat 440

                                                                       
Query: 241 actgtctaattctggagaaattatattaccattgatgtgttatcatttaccaaatgtgta 300
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgtctaattctggggaaattatattaccattgatgtgttatcatttaccaaatgtgta 500

                                                                       
Query: 301 ttaagaatatgctggaaattactataaaatattgttctagaaaaattagtcagtacttac 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaagaatatgctggaaattactataaaatattgttctagaaaaattagtcagtacttac 560

                                                                       
Query: 361 attcagagagaatgggactggaaatatcagggagatgtttcctggtgtcttctacaagta 420
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 attcagagagaatgggactggaaatatcagggagatgtttcctggtgttttctacaagta 620

                                                                       
Query: 421 acctaataagtaaaaatacataatatgaaacatttcttgatcatcaagtacccatatttc 480
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 acctaataagtaaaaatacataatatgaaacatttcttgatcatcaagtacccataattc 680

                                                                       
Query: 481 aaaagccatttacatggtacttaaaaataaccataatacccaaacttatggtcctgggaa 540
           |||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 681 aaaagccatttacatggtacttaaaaataaccataataaccaaacctatggtcctgggaa 740

                                                                       
Query: 541 tagaataaatctgttctctaccagaaattgaaaatattcagcttatctagttatttaaag 600
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taggataaatctgttctctaccagaaattgaaaatattcagcttatctagttatttaaag 800

                                         
Query: 601 taatgaatcaggtttttgttttgattttaa 630
           ||||||||||||||||||||||||||||||
Sbjct: 801 taatgaatcaggtttttgttttgattttaa 830


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1030
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1020
Effective search space:   632400
Effective search space used:   632400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)