Query= MSMg01no428_m03.b1 MSMg01no428_m03.b1 CHROMAT_FILE:
MSMg01no428_m03.b1 PHD_FILE: MSMg01no428_m03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:02 2005
(551 letters)
>mm_chr5_10233081_10234031
Length = 951
Score = 1004 bits (519), Expect = 0.0
Identities = 543/551 (98%)
Strand = Plus / Plus
Query: 1 cccattttgaatgtgttatttgaatttctgaggtccagcttattgagctctttgtatata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cccattttgaatgtgttatttgaatttctgaggtccagcttattgagctctttgtatata 260
Query: 61 ttggatactagtcccttatcagatttaggattggtaaaactcctttcccaatctgttggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttggatactagtcccttatcagatttaggattggtaaaactcctttcccaatctgttggt 320
Query: 121 ggcctttttgtattattgaaagtgtcttttgccttacagaagctttgcaattttatgagg 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggcctttttgtattattggaagtgtcttttgccttacagaagctttgcaattttatgagg 380
Query: 181 tcccaattgtcaattctttatcttacagtacaagccattattgttctgtttaggaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcccaattgtcaattctttatcttacagtacaagccattattgttctgtttaggaatttt 440
Query: 241 tcccctgtgtttatatctttgaggcttttcgccattttcccctctatacatttcagtgtc 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tcccctgtgcccatatctttgaggcttttcgccattttcccctctatacatttcagtgtc 500
Query: 301 tctggttttatgtggcaatctttgatccacttagacttgatctttgtacaaggagataag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctggttttatgtggcaatctttgatccacttagacttgatctttgtacaaggagataag 560
Query: 361 aatggatcaattcacattcttctacatgataaccaccaattgtgccagcaccattttttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatggatcaattcacattcttctacatgataaccaccaattgtgccagcaccattttttg 620
Query: 421 aaaatgctgtctttttttccactggatcaaactaaaataaaatattgtgatatcaacatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 621 aaaatgctgtctttttttccactggatcaaactaaaataaaatattgtgatatcaacgtg 680
Query: 481 aatgttacacaaaatattattacattaagtataactaatattaatatgtgcagaattatg 540
|||||||||||||| |||||||| |||||||||| |||||||||||||||||||||||||
Sbjct: 681 aatgttacacaaaagattattacgttaagtataattaatattaatatgtgcagaattatg 740
Query: 541 aatgtgctgtg 551
|||||||||||
Sbjct: 741 aatgtgctgtg 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no428_m03.g1 MSMg01no428_m03.g1 CHROMAT_FILE:
MSMg01no428_m03.g1 PHD_FILE: MSMg01no428_m03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:02 2005
(163 letters)
>mm_chr5_10388103_10388666
Length = 564
Score = 252 bits (130), Expect = 1e-71
Identities = 154/162 (95%), Gaps = 1/162 (0%)
Strand = Plus / Minus
Query: 1 tcattgtcatagagaatttactggcattaggtagtgaggtggtgaacacagtgaataggt 60
|||||||||||||||||||||||| ||||| |||||||||||| |||| | |||||||||
Sbjct: 362 tcattgtcatagagaatttactgggattagatagtgaggtggttaacagaatgaataggt 303
Query: 61 tgacaagaactgctctaaccatgaagtttttattactatggctctgtgttatacagtgta 120
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 302 tgacaagaactgctctaatcatgaagtttttattactatggctctgtgttatacagtgaa 243
Query: 121 atctgaaccatgcagttttt-attactatggctttgtgatat 161
|||||||||||||||||||| |||||||||||||||||||||
Sbjct: 242 atctgaaccatgcagttttttattactatggctttgtgatat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 564
Length adjustment: 8
Effective length of query: 155
Effective length of database: 556
Effective search space: 86180
Effective search space used: 86180
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
