Query= MSMg01no429_m06.b1 MSMg01no429_m06.b1 CHROMAT_FILE:
MSMg01no429_m06.b1 PHD_FILE: MSMg01no429_m06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:21 2005
(217 letters)
>mm_chr5_106470866_106471481
Length = 616
Score = 389 bits (201), Expect = e-113
Identities = 213/217 (98%), Gaps = 1/217 (0%)
Strand = Plus / Minus
Query: 1 ctagagagctatatcaataaagtaaatggttgggagatcttcaactgattatccagggga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 ctagagagctatatcaataaagtaaatggttgggagatcttcaactgattatccagggga 357
Query: 61 taccctcaagttcttgacccccccaatagcaacttcatcttcctctcctctgcagctctc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 taccctcaagttcttga-ccccccaatagcaacttcatcttcctctcctctgcagctctc 298
Query: 121 ttcctgacatctatctggaaatgatttttcttgcacaagctcagatacccaagttctgag 180
|||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct: 297 ttcctgacatctatctggaaatgagttctcttgcacaagctcagatacccaagttctgag 238
Query: 181 gctctagaaagggctccagggctacataggagcttgt 217
|||||||||||||||||||| ||||||||||||||||
Sbjct: 237 gctctagaaagggctccaggtctacataggagcttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 217
Length of database: 616
Length adjustment: 9
Effective length of query: 208
Effective length of database: 607
Effective search space: 126256
Effective search space used: 126256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no429_m06.g1 MSMg01no429_m06.g1 CHROMAT_FILE:
MSMg01no429_m06.g1 PHD_FILE: MSMg01no429_m06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:21 2005
(159 letters)
>mm_chr5_106276750_106277308
Length = 559
Score = 292 bits (151), Expect = 7e-84
Identities = 157/159 (98%)
Strand = Plus / Plus
Query: 1 aatttattttcgctaagaaaagaaaacatattcttggtaaagtgccagttctcaacaagc 60
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 aatttattttcgttaagaaaagaaaacatatccttggtaaagtgccagttctcaacaagc 260
Query: 61 tgattcataacaagtctttctctgggaaaacagacgattgaatcattctcaagtctttgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgattcataacaagtctttctctgggaaaacagacgattgaatcattctcaagtctttgc 320
Query: 121 tacctgaagtcattgtggctgtccataaatatctcaacc 159
|||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tacctgaagtcattgtggctgtccataaatatctcaacc 359
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 159
Length of database: 559
Length adjustment: 8
Effective length of query: 151
Effective length of database: 551
Effective search space: 83201
Effective search space used: 83201
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
