Query= MSMg01no431_n09.b1 MSMg01no431_n09.b1 CHROMAT_FILE:
MSMg01no431_n09.b1 PHD_FILE: MSMg01no431_n09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:19 2005
(243 letters)
>mm_chr5_92775180_92775822
Length = 643
Score = 447 bits (231), Expect = e-130
Identities = 240/243 (98%)
Strand = Plus / Minus
Query: 1 aatggcctgaacaagaagttggggtgggtgggagacaaacaagtcaggagaactaccaca 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 443 aatggcctgaacaagaagttggggtgggtaggagacaaacaagtcaggagaactaccaca 384
Query: 61 ctacttcttggtttagcctccttcgaggctgatcgtgtaggcttcctgtgactggtgagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctacttcttggtttagcctccttcgaggctgatcgtgtaggcttcctgtgactggtgagg 324
Query: 121 caaaaaaggaaaaggcctgagtctcagtggaccctgtcctgatgagttttcactgtcatc 180
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 323 caaaaagggaaaaggcctgagtctcagtggaccctgtcctgatgagttttcactgtcaac 264
Query: 181 tccacacagctgagagtccctgggaagaaggtgggcttgtgtgggtgagcagactggcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tccacacagctgagagtccctgggaagaaggtgggcttgtgtgggtgagcagactggcct 204
Query: 241 gtg 243
|||
Sbjct: 203 gtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no431_n09.g1 MSMg01no431_n09.g1 CHROMAT_FILE:
MSMg01no431_n09.g1 PHD_FILE: MSMg01no431_n09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:20 2005
(432 letters)
>mm_chr5_92620311_92621142
Length = 832
Score = 781 bits (404), Expect = 0.0
Identities = 425/432 (98%), Gaps = 1/432 (0%)
Strand = Plus / Plus
Query: 1 atcctaaggaaattctccaaaattcaagaaaaactgttaaatgaacatttaccattttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 atcctaaggaaattctccaaaattcaagaaaaactgttaaatgaacatttatcattttga 260
Query: 61 aaagtggaaattatctttagtgttaaaagcatgtaatgtgccgggcatggtggtacacgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagtggaaattatctttagtgttaaaagcatgtaatgtgccgggcatggtggtacacgc 320
Query: 121 ctttaatcccagcactcgggaggcaaaggcatacagagaaaccctgcctcgaaaaaaacc 180
||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct: 321 ctttaatcccagcactcgggaggcagaggcatacagagaaaccttgcctcgaaaaaaacc 380
Query: 181 aaaaataaaagtaatgtaatttatactctatctacttgatcaggtattgaatgagcatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaataaaagtaatgtaatttatactctatctacttgatcaggtattgaatgagcatca 440
Query: 241 ataagtatggtcttatggctgaaaagataactcatgaagagcagagctgggatctcagca 300
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataagtatggccttatggctgaaaagataactcatgaagagcagagctgggatctcagca 500
Query: 301 ccaccgtgacagaccaggcgctcagtgctcctgtcaccccagctttgagcagaacagagt 360
||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 501 ccaccgtgacagaccaggcactcagtgctca-gtcaccccagctttgagcagaacagagt 559
Query: 361 tgctaggacttgtgggctgtcagcctagccaagaagacatgagctataggttctgggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgctaggacttgtgggctgtcagcctagccaagaagacatgagctataggttctgggaaa 619
Query: 421 gactctgtctca 432
||||||||||||
Sbjct: 620 gactctgtctca 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 432
Length of database: 832
Length adjustment: 9
Effective length of query: 423
Effective length of database: 823
Effective search space: 348129
Effective search space used: 348129
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
