Query= MSMg01no434_p23.b1 MSMg01no434_p23.b1 CHROMAT_FILE:
MSMg01no434_p23.b1 PHD_FILE: MSMg01no434_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:34 2005
(433 letters)
>mm_chr5_149384993_149385825
Length = 833
Score = 787 bits (407), Expect = 0.0
Identities = 423/429 (98%), Gaps = 2/429 (0%)
Strand = Plus / Plus
Query: 5 gaattcctcagtgcctacacagcatggacatgaatttgtcttttaaaaggtagtcaaagt 64
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 207 gaattcctcagtgccaacacagcatggacatgaatttgtcttttaaaagttagtcaaagt 266
Query: 65 aacaagtgcagaggctggagagatggctcagcagctaggagcacaggatgctcttgcagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aacaagtgcagaggctggagagatggctcagcagctaggagcacaggatgctcttgcagt 326
Query: 125 ggacctcgatttgactcccagtatgcacatggtggctcatagccatctgtagtccagttc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 327 ggacctcgatttgactcccagtatgcacatggtggctcatagccatctgtagcccagttc 386
Query: 185 tacaggatctgatgccctcttctgactctaagggcaacagttacatacatggtgtgtgtg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tacaggatctgatgccctcttctgactctaagggcaacagttacatacatggtgtgtgtg 446
Query: 245 tgtgtacaggcaaacacttatacacacaaataaatgtaaaaacagtttaaatgtcagagt 304
||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 447 tgt--acaggcaaacacttatacacacaaataaatataaaaacagtttaaatgtcagagt 504
Query: 305 aaagcttaacatattttagttgaaaaggcagatatgtggaatgaagggtatttcccagta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aaagcttaacatattttagttgaaaaggcagatatgtggaatgaagggtatttcccagta 564
Query: 365 gaagcacatatcaccaatatcaatgcaactattctgccagtttttaaatgagcaagttat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gaagcacatatcaccaatatcaatgcaactattctgccagtttttaaatgagcaagttat 624
Query: 425 gtattttaa 433
|||||||||
Sbjct: 625 gtattttaa 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no434_p23.g1 MSMg01no434_p23.g1 CHROMAT_FILE:
MSMg01no434_p23.g1 PHD_FILE: MSMg01no434_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:34 2005
(237 letters)
>mm_chr5_149546610_149547247
Length = 638
Score = 292 bits (151), Expect = 1e-83
Identities = 154/155 (99%), Gaps = 1/155 (0%)
Strand = Plus / Minus
Query: 1 tagaagactgtgaatggcaagaggatggtacagcctgggctgttacaaagtagctaccga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tagaagactgtgaatggcaagaggatggtacagcctgggctgttacaaagtagctaccga 251
Query: 61 aggacagatccacaaagctctgggga-ttttttttttaaatgccatagctcagtggttct 119
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 250 aggacagatccacaaagctctggggatttttttttttaaatgccatagctcagtggttct 191
Query: 120 caacctgtgggtcacaacccccacatggggtcaca 154
|||||||||||||||||||||||||||||||||||
Sbjct: 190 caacctgtgggtcacaacccccacatggggtcaca 156
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 638
Length adjustment: 9
Effective length of query: 228
Effective length of database: 629
Effective search space: 143412
Effective search space used: 143412
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
