NNNNAATCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAGGTTATTTAAAGAATACTTCACTAATCCCCCTATAAAC
CTCTTAATTTTATTTTATATAATCTTATTTTATATAAGTATACATGCTGC
AAAAATATAAGTCCATATTTTATATACACAGTCATAAATCACAGGTTGCC
TATTTATAACTGAATTTTGTCATCTTTTCTAGTTTAAATTATAAAAGTTG
TATTACTAGGCCCAACAACATTCTTCTGTGATATTTCATTGTTTGACACT
CTTATGAGAATGCCTGAACAAATGTAAGTAAAGAATGTGGAATCTGGCTA
GCAACATGGCATGCCAAGTTGCTAACAATGTTTTTTAAATTCATATTTTT
CTTATTGTTCATAATAGGATAGAATTATACTTTTACTTCTTACTGGTAGA
CATTATAGTTGGTAACAAATTTGTGTATGTTTATTGCAAAAATATAATCT
GATTTTCTGAGCAACGTTCATTAATTTTACTTGGGTATAGAACGCATACT
TTAGTCAAGATCAATTAGTGCCACCTACCAATGGAGACAAATGTCTGGCC
ATCGAAGTGTAATTTTTACAAAATGTACTTTGTATGACTGTACAGCTTAA
GCTTTGTTGATAAGTTTTTATTGATAATTACTTATGAATTTCTATGTTAT
TCTCATGGAAGTTCCCTTAATACAAAATCAT

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXACTCTGTAGACCAGGCTGGCCTCGAAC
TCAGAAATGCTCCTGCCTCTGTCTCCCAAGTGCTGGGCTTAAAGGCGTGC
ACCACCACCATCCAGCTATAAAAGTATTTCTAAAGACAATAGGAACACAT
ATTATTTTTCTGTTTAAAAATAAGCCTTTTGGTGTATCATTAAGTATCTA
TGAAAAAATTGTGTAATTAATAATAAAAAATCAATCAATCAATCAATGGA
TGTACAAAATAATTTTTAATGAAGTAAGCAATGATGATATAACAGGGTGT
TAAGTGCGCTAGATGCAAAATTTGGCTGACATAAAGATTGGTTTAAGAGA
AACTACTGACCACTTCTTCAGTATTTGGAACCATGCCAATATATTCAGTG
TGAAATAAGTTCTGTTTATGTTTCAGTGTCTGTAAGATGTCGGGAACTTA
TATGAAAATTGCACTTTCTGTTATCTCATTGAAAGAATATAGAAATTAAA
TAAAAAGGGAAAAACTAANAGCAAATCTAGATCATGGATAAAATCAATCT
CTTTTTTTTATTACGNATTTTCCTCAATTTTCATTCCCAAAGCTATCCCC
CCAAGTCCCCCCCCAATTCCCCTAAACAAAAAATTTCCATTTTTTTGGCC
CCTGGCGTTCCCCCTGGAATGGGGGGATATAAAAA

Query= MSMg01no436_b05.g1 MSMg01no436_b05.g1 CHROMAT_FILE:
MSMg01no436_b05.g1 PHD_FILE: MSMg01no436_b05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:03 2005
         (497 letters)



>mm_chr5_10780699_10781592
          Length = 894

 Score =  886 bits (458), Expect = 0.0
 Identities = 482/492 (97%), Gaps = 5/492 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   actctgtagaccaggctggcctcgaactcagaaatgctcctgcctctgtctcccaagtgc 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 actctgtagaccaggctggcctcgaactcagaaatgctcctgcctctgcctcccaagtgc 260

                                                                       
Query: 61  tgggcttaaaggcgtgcaccaccaccatccagctataaaagtatttctaaagacaatagg 120
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggcataaaggcgtgcaccaccaccatccagctataaaagtatttctaaagacaatagg 320

                                                                       
Query: 121 aacacatattatttttctgtttaaaaataagccttttggtgtatcattaagtatctatga 180
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 321 aacacatattatttttctgtttaaaaataagccttttggtgtatcattaagtatttatga 380

                                                                       
Query: 181 aaaaattgtgtaattaataataaaaaatcaatcaatcaatcaatggatgtacaaaataat 240
           ||||||||||||||||||||||||||||||||||||||||    ||||||||||||||||
Sbjct: 381 aaaaattgtgtaattaataataaaaaatcaatcaatcaat----ggatgtacaaaataat 436

                                                                       
Query: 241 ttttaatgaagtaagcaatgatgatataacagggtgttaagtgcgctagatgcaaaattt 300
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 437 ttttaatgaagtaagcaatgatgatataacagggtgttaagtgctctagatgcaaaattt 496

                                                                       
Query: 301 -ggctgacataaagattggtttaagagaaactactgaccacttcttcagtatttggaacc 359
            ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 497 tggctgacataaagattggtttaagagaaactactgaccacttcatcagtatttggaacc 556

                                                                       
Query: 360 atgccaatatattcagtgtgaaataagttctgtttatgtttcagtgtctgtaagatgtcg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 atgccaatatattcagtgtgaaataagttctgtttatgtttcagtgtctgtaagatgtcg 616

                                                                       
Query: 420 ggaacttatatgaaaattgcactttctgttatctcattgaaagaatatagaaattaaata 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 ggaacttatatgaaaattgcactttctgttatctcattgaaagaatatagaaattaaata 676

                       
Query: 480 aaaagggaaaaa 491
           ||||||||||||
Sbjct: 677 aaaagggaaaaa 688


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 497
Length of database: 894
Length adjustment: 10
Effective length of query: 487
Effective length of database: 884
Effective search space:   430508
Effective search space used:   430508
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)