TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCAGCAAGTTTTACGTTTAAGGACACCACAAGAATATATATATAGCATC
AAGTAACGTTGGACCATGGGACTCCCAGACCACTAATCTTGGGCTTCATG
TAGGTCCTCTAACAAGTGGAGGGGTGGGCCTGTCTTAGTCTATGTTCCCT
GCCACTGAATCCCCTTGCCCTGCCTCTACTGCCCAATTAGACCCCAGTGG
GAGAGGATATGCCCAGTCTTGTTGGGACTACATGTCCCAGAAAGGGAATG
GTACCCAAGTGGGGATCCCCCTCTCCAAGAAGAAAAGGCAACAATGAAGG
AAGGGATTTGTAAAAGTAAGACTCCCCTTCTCAGAGGAGGAGAGTAGAGA
GGGGGGTTGTGATCCCTAAGTTTTATGACCATCTCCCTTTTCCCTTTTAC
CTATTCATACTATCTTTTTTCCATACTATATATATGTTTTTTCCCCTCTT
TCCCCTTCACTTCTCCCCCTCTTTTTCTCCCCTCTCCTTTTCCCTTTTTC
TCCTTTTCTTTTCCTTTTCCCTTTACCTCCCTCCCCCTCCCCCCCTTTTA
TTTTCCCCCTCTTCCCATCTCTTTTTTTTTTTTTTTCTTCTCCCTTCTTC
TTTTCCTCTTTGCTTTCCCTCTTGCCTCCCCTCCTCTCTTTTTTCTCTTT
TCCCTCCCTCCCAATTATTTCCATTCACTATACCTCTTTCTTCGAAGTCC
TTTTTCCTCCATCCTCCCTGTCTTTATTTTTTCCTCCTTCTCCCTTTTTT
TTG

TGATAGTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTACAGTTATAAGAACGTTTATAGCTTA
GAACAGAGATTTATGAATTTAGTGACTACTAAGTATCTGTGCATGTATAT
TGATATATCAGTGTGTGAAATATTCATATACAGATAATTTTGTCATAAAA
TCACAAAATGGTTGACATTTATCTTTAGAATCCATTGCACACTCACCTTA
TTCAAATATTCCCAAATAAAACATATGAATAATAAAGGTATATAATTAAA
GGATTTCCACAGTATTATAATGTTGAATGTGATATTATATGAATATTAAT
TTATCAATTCATATTGCCTAATTAATTCATTGTATGAAAATATCTGTAGA
TATTGCATAAAGCTTTTTTAAAATAAATAATATTTCTGTAAAATAATACA
GAAAAGTCTACCAGTTGTTTAGAACTTCAAGCTCTTTTTTTGTGAAGATT
ATGGTCCATGTTCAGTTTACATGAAAGGATTAAATGCCTAAGGGAGAATT
TTGCTGTATGTGAATGGATAATAAATGTGATTTCATTTTTCTCCCTAGAT
TTGTCTCTTGAAAACTAAAGACCATTGCACTTTTTACTGTATTTAGTTTT
GCATCTAACATAATAATTACATTGCTAACGAAAAAGAGACAACGCGAGAA
TAATTTATATATTATGCTTGTCTGAATACCTGCATTATAAATATTCTATG
GTTTATAGTTTCTT

Query= MSMg01no437_i17.g1 MSMg01no437_i17.g1 CHROMAT_FILE:
MSMg01no437_i17.g1 PHD_FILE: MSMg01no437_i17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:02:58 2005
         (581 letters)



>mm_chr5_80071769_80072748
          Length = 980

 Score =  982 bits (508), Expect = 0.0
 Identities = 533/542 (98%), Gaps = 3/542 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttacagttataagaacgtttatagcttagaacagagatttatgaatttagtgactactaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttacagttataagaacgtttatagcttagaacagagatttatgaatttagtgactactaa 481

                                                                       
Query: 61  gtatctgtgcatgtatattgatatatcagtgtgtgaaatattcatatacagataattttg 120
           ||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 480 gtatctgtgcatgtatattgatatatcagtgtgagaaatattcatatacagagaattttg 421

                                                                       
Query: 121 tcataaaatcacaaaatggttgacatttatctttagaatccattgcacactcaccttatt 180
           ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 420 tcataaaatcacaaaattgttgacatttatctttaaaatccattgcacactcaccttatt 361

                                                                       
Query: 181 caaatattcccaaataaaacatatgaataataaaggtatataattaaaggatttccacag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 caaatattcccaaataaaacatatgaataataaaggtatataattaaaggatttccacag 301

                                                                       
Query: 241 tattataatgttgaatgtgatattat-atgaatattaatttatcaattcatattgcctaa 299
           ||||||||||||||||||||||  || |||||||||||||||||||||||||||||||||
Sbjct: 300 tattataatgttgaatgtgata--atcatgaatattaatttatcaattcatattgcctaa 243

                                                                       
Query: 300 ttaattcattgtatgaaaatatctgtagatattgcataaagcttttttaaaataaataat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttaattcattgtatgaaaatatctgtagatattgcataaagcttttttaaaataaataat 183

                                                                       
Query: 360 atttctgtaaaataatacagaaaagtctaccagttgtttagaacttcaagctcttttttt 419
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 atttctttaaaataatacagaaaagtctaccagttgtttagaacttcaagctcttttttt 123

                                                                       
Query: 420 gtgaagattatggtccatgttcagtttacatgaaaggattaaatgcctaagggagaattt 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtgaagattatggtccatgttcagtttacatgaaaggattaaatgcctaagggagaattt 63

                                                                       
Query: 480 tgctgtatgtgaatggataataaatgtgatttcatttttctccctagatttgtctcttga 539
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 62  tgctgtatgtgaatggataataaatgtgatttcatttctctccctagatttgtctcttga 3

             
Query: 540 aa 541
           ||
Sbjct: 2   aa 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 980
Length adjustment: 10
Effective length of query: 571
Effective length of database: 970
Effective search space:   553870
Effective search space used:   553870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)