TTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAAGA
AATTGTACCCTAGAAAACCAAATAACTCTATTAAAAATGGAGTACAAAGA
ATTCTCACCTGAGGAATACCAAGTTTCTGAGAAACTTCTCGAAAAACGTT
AAACATCCTTAATCACCAGGGAAATACAAATCAAAACAACCCTGAGATTC
TACCTCACACCATTTAGAATAGGTAAGATCAACAATTCAGGTGACAGCAG
ATTCTGGCTAGGGTGTGGAGGAAGAGGAACAGTCCTCCATTGAGAGTGGG
ATTGCAAGCTGGTACAACCACTCTGGAATTCACTTTAGTGGTTCCTTGGA
AAATTGGACATAGTACTACTGGAAGATCCAGCAATACCACTCCTGGGCAT
ATACCCAGAAGGTGCTCCAACTTGTAATAAGGACACATGCTCCACAATTT
TCACAGCAGCCCTATTTATAATAATCTGAAGCTCANAAGAACCCAGATGA
CCCTCAACATAAGAATAANATGTGGTACATTTACACAATGGAGTACTACT
CAGCTATTAAAATCAATGAATTTATGAAATTCTCAGGCAAATGGATGGAT
CTAGAGGATATCATCCTTGAGTGAGGGTATCCCATCCCAAAGGATTACCC
GGATACCAATTCCCTGATAAGTGGGTATTGGGGAGAAAATAAAAAGGCCA
AGAAACAATTGGTAAAATCTTGGCACTCCCAAAAGGAAAAACAAAGGGGG
GAAATTTGTTTCTTCTTTAAAAGGAAAA

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTTTTATCTTTGTAGTTAGTGTTAACTATTTAAA
ACCAAACCCTAATGCCCACCCCTCTATTGCCTAAATTGCAAATAGTTTCT
GACTTGTAGACTGTCTATTGTTAAGGTGATTCGAAAGAAATATATTCCAT
GTATTCAAAGAAGATGATTTGTGAAGGTTTTAATGAATCCTGTGACTTGA
TTCAGTGCATCCTAAGGAATTAATTAATTGATTAATTTAATTTTTAGATT
ATAATATAATTACATTTATTCCTTTCCTTTCCTACTTTCAAACACTCCCA
CATACCCCTCCCCACTGTCTTTCAAATAAATGACCTCTTTTATTTTTAAC
TATTTTTTTATTTGTTATTTTGTTCACATTTCAAATGTTGTCCCCTTTCC
TGGTTTCCCCTCTACTACCCTCATCCCATCTCCCCTCCCCCTGTCTATAT
GAGGGTGCTCCGCCACCCATCCATCCACCCCCATCTCACTGACCTAACAT
CCCCTCTGCTGGGGCAGTCCTCTGCTTTATCTGTGGCTGTAATCATGTGT
CCCTCCTCGTCTAATTCTTTGGTTGGGAATTAAATCCCTGGGACCTCCTT
TGTGTCCGTGTTTGCCACATTTATTCTTCCTCCTCTATTGTTGTTTTCCC
CTTTTTCCTCTCCTTCTTCCTCATTCTTTCCCACTTGGTTCCACATTCTC
TTCTTTTTTATGTTTACATCTCTCTTCCCTCG

Query= MSMg01no438_n05.g1 MSMg01no438_n05.g1 CHROMAT_FILE:
MSMg01no438_n05.g1 PHD_FILE: MSMg01no438_n05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:04:44 2005
         (444 letters)



>mm_chr5_84177608_84178451
          Length = 844

 Score =  806 bits (417), Expect = 0.0
 Identities = 435/441 (98%), Gaps = 1/441 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   tatctttgtagttagtgttaactatttaaaaccaaaccctaatgcccacccctctattgc 63
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 204 tatctttgtagttagtgttaactatttaaaaccaaaccctgatgcccacccctctattgc 263

                                                                       
Query: 64  ctaaattgcaaatagtttctgacttgtagactgtctattgttaaggtgattcgaaagaaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctaaattgcaaatagtttctgacttgtagactgtctattgttaaggtgattcgaaagaaa 323

                                                                       
Query: 124 tatattccatgtattcaaagaagatgatttgtgaaggttttaatgaatcctgtgacttga 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tatattccatgtattcaaagaagatgatttgtgaaggttttaatgaatcctgtgacttga 383

                                                                       
Query: 184 ttcagtgcatcctaaggaattaattaattgattaatttaatttttagattataatataat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttcagtgcatcctaaggaattaattaattgattaatttaatttttagattataatataat 443

                                                                       
Query: 244 tacatttattcctttcctttcctactttcaaacactcccacatacccctccccactgtct 303
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 444 tacatttattcctttcctttcctactttaaaacactcccacatacccctccccactgtct 503

                                                                       
Query: 304 ttcaaataaatgacctcttttatttttaactatttttttatttgttattttgttcacatt 363
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 504 ttcaaataaatgacctcttttatttttaactattttattatttgttattttgttcacatt 563

                                                                       
Query: 364 tcaaatgttgtcccctttcctggtttcccctctacta-ccctcatcccatctcccctccc 422
           ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 564 tcaaatgttgtcccctttcctggtttcccctctacaaaccctcatcccatctcccctccc 623

                                
Query: 423 cctgtctatatgagggtgctc 443
           |||| ||||||||||||||||
Sbjct: 624 cctgcctatatgagggtgctc 644


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 444
Length of database: 844
Length adjustment: 10
Effective length of query: 434
Effective length of database: 834
Effective search space:   361956
Effective search space used:   361956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)