Query= MSMg01no442_g13.b1 MSMg01no442_g13.b1 CHROMAT_FILE:
MSMg01no442_g13.b1 PHD_FILE: MSMg01no442_g13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:33 2005
(382 letters)
>mm_chr5_93140507_93141288
Length = 782
Score = 629 bits (325), Expect = 0.0
Identities = 352/361 (97%)
Strand = Plus / Minus
Query: 1 accctgtccaatgagaccaaacatttagtacaattcaattctctgtgcttctcctactag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 accctgtccaatgagaccaaacatttagtacaattcaattctctgtgcttctcctactag 302
Query: 61 ctcacaacaagggtaggcatggtgggagaggctggggcaggatgctgaggctccagccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcacaacaagggtaggcatggtgggagaggctggggcaggatgctgaggctccagccaa 242
Query: 121 gtagacacataccattaacaagatggctctaaatagggagtgcaatcacactcctatgta 180
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 241 gtagacacataccattaacaagatggctctaaatacggagtgcaattacactcctatgta 182
Query: 181 ttagctctagaaaacaaatatccatacaatacattctgaatgttcacggtaagcggtatt 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taagctctagaaaacaaatatccatacaatacattctgaatgttcacggtaagcggtatt 122
Query: 241 ggtagcaggagaataggttagtcaactcacatgactgcgaacaaatgcccagataaatca 300
|||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 121 cgtagcaggagaaaaggggagttaactcacatgactgcgaacaaatgcccagataaatca 62
Query: 301 cggcccagccgtacaatggaatataatctggcaataagtaagtgacgtgcgattatcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 61 cggcccagccgtacaatggaatataatctggcaataagtaagtgacgtgtgattatcttc 2
Query: 361 t 361
|
Sbjct: 1 t 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no442_g13.g1 MSMg01no442_g13.g1 CHROMAT_FILE:
MSMg01no442_g13.g1 PHD_FILE: MSMg01no442_g13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:33 2005
(244 letters)
>mm_chr5_92988742_92989382
Length = 641
Score = 410 bits (212), Expect = e-119
Identities = 229/236 (97%), Gaps = 3/236 (1%)
Strand = Plus / Plus
Query: 1 ttgagtttaggtgcatcggagactactacgtggttgagaccttgtttcacatacacaaac 60
||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||
Sbjct: 201 ttgagtttaggtgcatcagagactac---gtggttgagaccttgtttcacatacacaaac 257
Query: 61 acacaagaagatagacacacacagactaaacgacatgttgtgggtttgatgtcgcctgtg 120
|||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 acacaaaaagacagacacacacagactaaacgacatgttgtgggtttgatgtcgcctgtg 317
Query: 121 gactataatttcacagccttcctgctgagttgcaaggaggaaaccaaaccacagaggtta 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 318 gactataatttcacagccttccttctgagttgcaaggaggaaaccaaaccacagaggtta 377
Query: 181 tctgacagactggtcactcatttagctacatgaggactgtatttgctccccttctc 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tctgacagactggtcactcatttagctacatgaggactgtatttgctccccttctc 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 641
Length adjustment: 9
Effective length of query: 235
Effective length of database: 632
Effective search space: 148520
Effective search space used: 148520
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
