Query= MSMg01no442_h12.b1 MSMg01no442_h12.b1 CHROMAT_FILE:
MSMg01no442_h12.b1 PHD_FILE: MSMg01no442_h12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:38 2005
(247 letters)
>mm_chr5_103640048_103640694
Length = 647
Score = 470 bits (243), Expect = e-137
Identities = 246/247 (99%)
Strand = Plus / Minus
Query: 1 gttccgaagcctgcttctcattttgccagaaaacgaggtagctgtagccacagatagact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 gttccgaagcctgcttctcattttgccagaaaacgaggtagctgtagccacagatagact 388
Query: 61 ttttcctttttctctttcctcctcctacccctccctagacctctctgggctttgacgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ttttcctttttctctttcctcctcctacccctccctagacctctctgggctttgacgtca 328
Query: 121 tgtgtgctcctttcagttgccatagcaaccccattccccaagccctctgtccgtctcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgtgtgctcctttcagttgccatagcaaccccattccccaagccctctgtccgtctcctc 268
Query: 181 tgttaggttccacaatggtacaggcagcctcccgctgcacaatggtttccaggcagtgag 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tggtaggttccacaatggtacaggcagcctcccgctgcacaatggtttccaggcagtgag 208
Query: 241 agggtga 247
|||||||
Sbjct: 207 agggtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 247
Length of database: 647
Length adjustment: 9
Effective length of query: 238
Effective length of database: 638
Effective search space: 151844
Effective search space used: 151844
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no442_h12.g1 MSMg01no442_h12.g1 CHROMAT_FILE:
MSMg01no442_h12.g1 PHD_FILE: MSMg01no442_h12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:09:38 2005
(383 letters)
>mm_chr5_103447510_103448288
Length = 779
Score = 659 bits (341), Expect = 0.0
Identities = 372/383 (97%), Gaps = 4/383 (1%)
Strand = Plus / Plus
Query: 1 attgtccataatccacatagtgcagctgccaggagcttggtgtaccagtatcaagaaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgtccataatccacatagtgcagctgccaggagcttggtgtaccagtatcaagaaatg 260
Query: 61 aaattcccattgatggaaaaaaaaggccccaaagtcaatgtcagattattgagaacaaag 120
|||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatccccattgatggaaaaaaa-ggccccaaagtcaatgtcagattattgagaacaaag 319
Query: 121 atcggacatcagattcagaaactcaagactatttcgggggctgatgaaccaagatccatc 180
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 atcggacatcagattaaaaaactcaagactatttcgggggctgatgaaccaagatccatc 379
Query: 181 tcctccctgctggcagttcctggaaaatgagctttagaaggctcttaagattcagtagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tcctccctgctggcagttcctggaaaatgagctttagaaggctcttaagattcagtagac 439
Query: 241 cgaacttttcttaggtctccctggagccagacctgagtcaggacaatgaatgaaagcaaa 300
|||||||| | |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 440 cgaactttccc-aggtctccctggagccagacctgagtcaggacaatgaacgaaagcaaa 498
Query: 301 atgaaatagcagtgtgtaggagagcttgcccattgctctctacacaatgtttcttcttgt 360
||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 499 atgaaataggagtgtgtaggagagcttgcccattgctctctaca--atgtttcttcttgt 556
Query: 361 tatgaaaggagatggaaaagcca 383
|||||||||||||||||||||||
Sbjct: 557 tatgaaaggagatggaaaagcca 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 779
Length adjustment: 9
Effective length of query: 374
Effective length of database: 770
Effective search space: 287980
Effective search space used: 287980
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
