Query= MSMg01no445_c12.b1 MSMg01no445_c12.b1 CHROMAT_FILE:
MSMg01no445_c12.b1 PHD_FILE: MSMg01no445_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:16 2005
(259 letters)
>mm_chr5_13418757_13419415
Length = 659
Score = 445 bits (230), Expect = e-129
Identities = 251/258 (97%)
Strand = Plus / Plus
Query: 1 tttaatattaaccagatgagcaattgtagcatataattagacgtacagtattagcagact 60
|||||||||||||||||||||||||||||||||||||||||| || | ||||||||||||
Sbjct: 201 tttaatattaaccagatgagcaattgtagcatataattagacctagaatattagcagact 260
Query: 61 acttctgaccacagaatttcaggacctcaggacttatttgtctctttgaattgtaaagct 120
|| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 acatctgaccacagaatttcaggacctcaggacttatttgcctctttgaattgtaaagct 320
Query: 121 acagctttttgtgactcagggttccctttctggattgggtgtaccaatcttagattttgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acagctttttgtgactcagggttccctttctggattgggtgtaccaatcttagattttgt 380
Query: 181 aggcttgggttctttgggctcctctcagactcactcctctcgtcttctcctattcagttt 240
|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aggcttgggtgctttgggctcatctcagactcactcctctcgtcttctcctattcagttt 440
Query: 241 aagtcatagaacttttaa 258
||||||||||||||||||
Sbjct: 441 aagtcatagaacttttaa 458
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 259
Length of database: 659
Length adjustment: 9
Effective length of query: 250
Effective length of database: 650
Effective search space: 162500
Effective search space used: 162500
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no445_c12.g1 MSMg01no445_c12.g1 CHROMAT_FILE:
MSMg01no445_c12.g1 PHD_FILE: MSMg01no445_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:16 2005
(514 letters)
>mm_chr5_13562651_13563564
Length = 914
Score = 565 bits (292), Expect = e-165
Identities = 331/344 (96%), Gaps = 3/344 (0%)
Strand = Plus / Minus
Query: 1 ttagcatttgaataactgagggttgtgatggccaaaaggacaacctgaacagcagaattc 60
||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||
Sbjct: 352 ttagcttttgaataactgaggggtgtgatggccaaaaggacaacctgattagcagaattc 293
Query: 61 agtgatgcaatggggtgggagagccattaagcctcaaaacgacacaagagaagagttccg 120
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 292 agtgatgcaatggggtgggagagccattaagcctcaaaaagacacaagagaagagttccg 233
Query: 121 aacttggttccctccttgagctagacctagcttggagttatctgagagcctgtcagttgg 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 232 aacttggttccctccttgagctagacctagcttggagttatctgagagtctgtcagttgg 173
Query: 181 gtttgcctg-atcagactagttgatggacatatctctgaggcattttcatgattgatggc 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gtttgcctggatcagactagttgatggacatatctctgaggcattttcatgattgatggc 113
Query: 240 tgatggaggagggctcagctcactgtgggcaatgctgttatagtc-ggagctcctgcgtg 298
||| ||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 112 tgacggaggagggctcagctcactgtgggcaatgctgttataggcaggagctcctgcgtg 53
Query: 299 ggacaaggtaactggtttagcaaaagcaag-atgctacccattg 341
|||||||||||||||||||||| |||| || |||||||||||||
Sbjct: 52 ggacaaggtaactggtttagcagaagctaggatgctacccattg 9
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
