Query= MSMg01no445_j22.b1 MSMg01no445_j22.b1 CHROMAT_FILE:
MSMg01no445_j22.b1 PHD_FILE: MSMg01no445_j22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:53 2005
(335 letters)
>mm_chr5_129817562_129818296
Length = 735
Score = 596 bits (308), Expect = e-175
Identities = 329/336 (97%), Gaps = 2/336 (0%)
Strand = Plus / Plus
Query: 1 atgatcagtgtttcttcaattcaagtatttccaatggagcccattgctatggtctatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atgatcagtgtttcttcaattcaagtatttccaatggagcccattgctatggtctatttt 260
Query: 61 tataaagcaatttttatgctttagatttgttctctgtttcaagccttcccttgctccaaa 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tataaagccatttttatgctttagatttgttctctgtttcaagccttcccttgctccaaa 320
Query: 121 gtcatgaagttgctcaccctgcctccccaatcatccctaaaaatctctttcatatttaga 180
||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||
Sbjct: 321 gtcatgaagttgctcaccctgcctccccaatcatccccaaaattctctttcatatttaga 380
Query: 181 ccaaagctttacattaaaatatttggagtggaggggataagacatattcaaagatttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccaaagctttacattaaaatatttggagtggaggggataagacatattcaaagatttgct 440
Query: 241 ctctcttctatagaaatggaatggagaggaa-agcccagtctccatgcagggccattctc 299
|||||| ||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 441 ctctctcctatagaaatggaatggagag-aagagcccagtctccatgcagggccattctc 499
Query: 300 catgaattccgtgtttgattgcatgctcttatgtgt 335
||||||||| ||||||||||||||||||||||||||
Sbjct: 500 catgaattctgtgtttgattgcatgctcttatgtgt 535
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no445_j22.g1 MSMg01no445_j22.g1 CHROMAT_FILE:
MSMg01no445_j22.g1 PHD_FILE: MSMg01no445_j22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:13:53 2005
(243 letters)
>mm_chr5_129984970_129985612
Length = 643
Score = 462 bits (239), Expect = e-135
Identities = 242/243 (99%)
Strand = Plus / Minus
Query: 1 tttaggagctgctgtctgcagtctggggagagagaggcgctcctgaattccacctggaac 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 443 tttaggagctgctgtctgcagtctgggaagagagaggcgctcctgaattccacctggaac 384
Query: 61 ctccctcaggaagatgttccagggttccaccttacccatgaggggtcctgcctgtttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ctccctcaggaagatgttccagggttccaccttacccatgaggggtcctgcctgtttctt 324
Query: 121 tatatgtctgctcagaaagggtgatggatggatgagaggaccagaggaccaaccacagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 tatatgtctgctcagaaagggtgatggatggatgagaggaccagaggaccaaccacagtg 264
Query: 181 agcatggctgtagcttaggcgaatgggacaaagggcatccttattagttttagtcagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 agcatggctgtagcttaggcgaatgggacaaagggcatccttattagttttagtcagggt 204
Query: 241 ttt 243
|||
Sbjct: 203 ttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
