TCAATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCAAATAGATCCATACACACACACACACACACACACACACACAATATA
TATATATATATATATATATATACACACACACACACACACACACACATACA
CACACACTAACCTTACAAAACTCATATTCAAGTGAATGAAAAAACTCAGC
ATAAACCCAGATGCCCTAAACCTGAAATAGGGAAAGTGGGGACTAGCCTG
AAAGCATTAGCACAGGAGACAACGTTCTGAGAAGAACACTGGTAGTGTGC
ACTAAGATTTACAACATATGAGACTTCATGAAACTAAAATTCCTCTGTAG
GCAAAGGATATTGTCTATTGAACGAAGGGGCAGCCTATAAAAAGGGATAT
GATTTATAACACATCTGATAGAGAAAAATATGCAAATATACAAGGAACAA
GAAACCAAAAAAAATCAAATAATGCAATTCAGAAAATTGAATTCAGATCT
AAATACGGAATTCTCAATAGAGGAATCTCAAATGGCCAAGAAATGCTTAA
AGTTCAACATTCTTAGATATCAGGGAAATGTAAATCAAAATTCCTTTGAA
ATTCAAAGTTTTTGACATAATGGTTGAAATTAAAAACACACCTGCCAACT
CTTACTGGAGAGTGTGAGCATTGCTGGCTGTAGAGAAAACCTGTACAGTC
TCTATAGTAATCAATATGGCAGTTCCTCAGAGGATGGGGAAATTACTTCC
CTCAGACAGATATACTGTTCTAGGGCATATACAAAAGGACTCTCCATCCT
C

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXACTACTCATATCTTGAACATCAAGAA
TGCTTCTATATGTGTGCCTTTTTGTTGAATAACAATGTAATTGACAGGAT
ATTAAGTTTTGTTTATATGCTTGTTGTTTTATTAGCCATATTAATTCTTC
ATCTTTAGTTTTCAGTCATTCTTAAAGAGTTTGCTGGATACCTCTTGTAG
AAAGATTTGCAGGCAGAATTAATTCTAGGTTCTTTTTATCATGAAAGTAT
TTTCCATGCAGAAAACTATCATTAAGAAGAAAGTTATCTTTACTTCATCA
CTATATGCAGAGTGGCTTTGATTATAAAATGTATCAGAATTAATATTGTG
CTATTCTGAACTTTGGGCTCCAGGAACCTTACTGCCTCTTTTCTTGTCTT
TGTTTCATCTCTCATTCAGTAAAAAAAAACCTGGTATAGTAGAGTTAATG
TTAAGAAAACAGGGAGAGAAGAAGTAGCCATACTGTTCGAAACAAGAGAA
AGAGAGTAGATACTGAAGAAAACATAATTAAGCTAGCAAAATTGCTAAGC
GGAACCACAGCTAACAGAGAACACAACACAGAGTCAAACTGAGATGAATC
ATCCACCACAGTTTCATAGTCAAGCAGTGAACTAACCTGAAACTACAAAG
ATTTTTTTTTCATTTTTGCTATATTACTACAAATAGTAATTAATGAAGAT
TATATATTCTTTTATTTAAAAACTAATGTCATTTGTN

Query= MSMg01no451_f18.g1 MSMg01no451_f18.g1 CHROMAT_FILE:
MSMg01no451_f18.g1 PHD_FILE: MSMg01no451_f18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:35 2005
         (675 letters)



>mm_chr5_57439047_57440121
          Length = 1075

 Score = 1100 bits (569), Expect = 0.0
 Identities = 591/605 (97%), Gaps = 11/605 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   actactcatatcttgaacatcaagaatgcttctatatgtgtgcctttttgttgaataaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 actactcatatcttgaacatcaagaatgcttctatatgtgtgcctttttgttgaataaca 546

                                                                       
Query: 61  atgtaattgacaggatattaagttttgtttatatgcttgttgttttattagccatattaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 atgtaattgacaggatattaagttttgtttatatgcttgttgttttattagccatattaa 486

                                                                       
Query: 121 ttcttcatctttagttttcagtcattcttaaagagtttgctggatacctcttgtagaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttcttcatctttagttttcagtcattcttaaagagtttgctggatacctcttgtagaaag 426

                                                                       
Query: 181 atttgcaggcagaattaattctaggttctttttatcatgaaagtattttccatgcagaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atttgcaggcagaattaattctaggttctttttatcatgaaagtattttccatgcagaaa 366

                                                                       
Query: 241 actatcattaagaagaaagttatctttacttcatcactatatgcagagtggctttgatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 actatcattaagaagaaagttatctttacttcatcactatatgcagagtggctttgatta 306

                                                                       
Query: 301 taaaatgtatcagaattaatattgtgctattctgaactttgggctccaggaaccttactg 360
           |||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 305 taaaatgtgtcagaattaatattgtgctattctgaactttgagctccaggaaccttactg 246

                                                                       
Query: 361 cctcttttcttgtctttgtttcatctctcattcagt-----------aaaaaaaaacctg 409
           ||||||||||||||||||||||||||||||||||||           |||||||||||||
Sbjct: 245 cctcttttcttgtctttgtttcatctctcattcagtaaaaaaaaaaaaaaaaaaaacctg 186

                                                                       
Query: 410 gtatagtagagttaatgttaagaaaacagggagagaagaagtagccatactgttcgaaac 469
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 185 gtatagtagagttaatgttaagaaaacagggagagaagaactagccatactgttcgaaac 126

                                                                       
Query: 470 aagagaaagagagtagatactgaagaaaacataattaagctagcaaaattgctaagcgga 529
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aagagaaagagagtagatactgaagaaaacataattaagctagcaaaattgctaagcgga 66

                                                                       
Query: 530 accacagctaacagagaacacaacacagagtcaaactgagatgaatcatccaccacagtt 589
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65  accacagctaacagagaacacaacacagagtcaaactgagatgaatcatccaccacagtt 6

                
Query: 590 tcata 594
           |||||
Sbjct: 5   tcata 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 675
Length of database: 1075
Length adjustment: 10
Effective length of query: 665
Effective length of database: 1065
Effective search space:   708225
Effective search space used:   708225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)