GGAGACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCAGAGGATC
CGCGGAATTCCAGGTGTTTCTGCCATTGGGAGGCTCTGTTTAAATCATAG
GTTGAAAGTAGAAGAAAAGTTGCTGATGCTTTATTCTGCCCCTGGAATAT
AAAAACTCACTGAATGGGCACTGGGGGTCGGGACCTCTAGTTTGGGTCTG
GGATGACCCCTGTGCACTGGAATAATAAATTCCTCTTGCTTTTTGCATCC
ATCCAGGCTCCACGTGGTTCACTCAGGGGTCTCTGGTAAGCTAAGGCTCC
CCGGAGTCTTACAGCAGAAGCTGAACAAAGGTGAGGCTCTTGGTCTGGAT
GAGGCAGGAATGCTCAAGTGCGCACAGTGCTGGCTGACATGGGAGGCTTG
CTCACATCCCAGAAAGCATGGTGGTTTCAGTGGAGTGGCAGAGCTGTGAC
TCCACCGGGATAGCTAGAGAAAGTTGCAAGAATAATGAAGGACAATAGAA
GGCATGCTTGCAGGCCAATTTGGTAAAATTATTTTGAGTCTGTGGCCATT
AAAATGCAGATGTTAAAGGGTTTCTGGCCATGCCTTGTGTGCTGATGTCA
TGTGGACGGATAGATGTGGCTCTCTTTCTTCACCAGCTGTTCAATCCATT
TGGTAAATCCCAAGGAAACGAGACCTCCCTTCCGGGGGGGCCCTTAAGGG
AAACCGATCTTTATCTCCTGATTATTTCCTCTTTTGG

TGATGTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTGGGTTAGACAGGATTCAA
GACATGTAGATGTCTTTGGCATCAGAATCCAAAGGTTTCTTTTATCTCCC
CGATTGGAGTTACACTTAAAGTGCTTCAAAAATACCTGTGTTTGTATTTG
AAGTTACAGTACTGTGAAGAGGCTTGCTGAGTACAGTAGGGGGTCTTCAG
TTTTACTATCTTAATAACTAATGGGATATGTGGTAGACATTTGACTTCCA
AGAGCAGGTCTCAAAGGAGGTGTCTATTGATATTATATTGATGATTATGT
TTTCATTGTAAGTTCAAATTTTAGATTTGAGCAGTCAATATCAAAATTAT
ATATGCTTTTGTAGCCAGAAGGGTTTTTTTTTTTGACAGAAACTTTACAT
GCTACACAGAGGTCTATATTCATATAGTCCCGCATCAAAGGAAAAGGTAC
AGTGTATCTTTATTTCCCTATAGTTCCAGTAACTTAAGGGTTCCATATGT
CAAATCATTCAGGTAAGACAGATTAATAACAACCAAAATGCTAAGTTCTG
TGAACATCTTACTGGATGTGTTTATTTTGGTAATAAGAGTACTAGAAAGA
AAAAAAAACTTTGGAAGCAAGAGTTGAAAATACAGGAATTCATTTTTCCC
AATGCGTTCCAAGTACCATAAGCACTGTGATGG

Query= MSMg01no451_i08.g1 MSMg01no451_i08.g1 CHROMAT_FILE:
MSMg01no451_i08.g1 PHD_FILE: MSMg01no451_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:21:48 2005
         (639 letters)



>mm_chr5_8360418_8361453
          Length = 1036

 Score = 1133 bits (586), Expect = 0.0
 Identities = 625/640 (97%), Gaps = 5/640 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgggttagacaggattcaagacatgtagatgtctttggcatcagaatccaaaggtttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 ttgggttagacaggattcaagacatgtagatgtctttggcatcagaatccaaaggtttct 777

                                                                       
Query: 61  tttatctccccgattggagttacacttaaagtgcttcaaaaatacctgtgtttgtatttg 120
           |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||
Sbjct: 776 tttatctccccgattggagttacacttttagtgcttcaaaaatacctgtgtttgtatttg 717

                                                                       
Query: 121 aagttacagtactgtgaagaggcttgctgagtacagtagggggtcttcagttttactatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 aagttacagtactgtgaagaggcttgctgagtacagtagggggtcttcagttttactatc 657

                                                                       
Query: 181 ttaataactaatgggatatgtggtagacatttgacttccaagagcaggtctcaaaggagg 240
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 656 ttaataactaatggaatatgtggtagacatttgacttccaagagcaggtctcaaaagagg 597

                                                                       
Query: 241 tgtctattgatattatattgatgattatgttttcattgtaagttcaaattttagatttga 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 596 tgtctattgatattatattgatgattatgttttcattgtaagttcaaattttagatttca 537

                                                                       
Query: 301 gcagtcaatatcaaaattatatatgcttttgtagccagaagggtttttttttttgacaga 360
           |||||||||||||||||||||||||||||||||||||||||||    |||||||||||||
Sbjct: 536 gcagtcaatatcaaaattatatatgcttttgtagccagaaggg----tttttttgacaga 481

                                                                       
Query: 361 aactttacatgctacacagaggtctatattcatatagtcccgcatcaaaggaaaaggtac 420
           ||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 480 aacattacatgctacacagaggtctatattcatatagtcccccatcaaaggaaaaggtac 421

                                                                       
Query: 421 agtgtatctttatttccctatagttccagtaacttaagggttccatatgtcaaatcattc 480
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 420 agtgtatctttatttccctatagttccagtagcttaagggttccatatgtcaaatcattc 361

                                                                       
Query: 481 aggtaagacagattaataacaaccaaaatgctaagttctgtgaacatcttactggatgtg 540
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aggtaagacagattaataataaccaaaatgctaagttctgtgaacatcttactggatgtg 301

                                                                       
Query: 541 tttattttggtaataagagtactagaaag-aaaaaaaaactttggaagcaagagttgaaa 599
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 300 tttattttggtaataagagtactagaaagaaaaaaaaaactttggaagcaagagttgaaa 241

                                                   
Query: 600 atacaggaattcatttttcccaatgcgttccaagtaccat 639
           |||||||||||||||||||| |||||||||||||||||||
Sbjct: 240 atacaggaattcatttttccaaatgcgttccaagtaccat 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 639
Length of database: 1036
Length adjustment: 10
Effective length of query: 629
Effective length of database: 1026
Effective search space:   645354
Effective search space used:   645354
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)