GGGGTTTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXCGCGGAATTCACTACTTTAATTTGAGCTTTTATATTTTGTTTCACTGT
GATGATTTTCTGAAATTGATAGTGATTAATTGGGAGATGATCTGCTCATA
ACAGAATGAAATAAATTAATGTGATTTTTCTGCTAGGATCTCATAGTGTG
GTCAAGTGCTCTTAACTGTGATCAGGAGTCAAGAAGAGCTTTGTGTTGTA
AAAGTCAATAGGAAGGACATTAGAAGTGGAAGATTTAATGGATTAAATAT
TAATGGACTTGATGATTACAACCAGAGCATCACTGACGCTCCAGACTGAA
TCGTGTCCTAGAGCATCAGGGATGTGCATGCTCACTTATGAGCTCAAACT
CCTCAGAGACTTGGGGCCTGTAGAAAATAACCAATTTATCTTCTCATATT
CTACTTTTGCCTTTTTTCCCAGTGTCTCTGGCTTCTATTTATTAAATTCA
TCTGGAGCACTAGAATAGCTCAGAGGCAGATTACTATTAAAGTCTATAAG
ATGAAGAAATAAATTGGGACTGCTCTTAATGCTGAAAGAAATTGATCCTA
GTTGAGGTCCAAGATCCAAGGAACTCTGAAATAATTTACCACTTGTTGTT
TCTTCTTGTTTTGTTCTAAAAATGGTCTATACTATATTTTATTTGAATCG
TGTGTGTGTGTTGTATGTCTACGTGGGGTGCG

TTTTTTTCCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTATGTGTGTGAAAGTGTAT
GTCTGTGTCTACGTGCATTCTGTGCCTTCCCCTTGGCTTTTATTCTTGTT
GGTTGTTCTGTCCTACACCAGTTTTGCTTGCTCTGGCTTTATCTTATTGC
ATTTTATTATTATTCCTTAGATTCTGTTTTTCTAATGAGAAGCAGATAGG
GTGTGGATCTGGATGGGATGGGAGGGCAAGAGGAATTTGGAGTGTTAGGG
GTTATAGGGGAAGGNNNNNNNNNNTTNNNNNNNTNNTTTNNNTNTTTTTT
TTTTTTTTTTTTTTTTTTTTTTTTTTNTATTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTGTTCCCTTTTTTTTTTTTTTTTTTGTTTGGTT
TTTGTGTTTTTTTTTTTTTTGTTGTTGTTTTGTTTTTTTTTTTTTTTTTG
TTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTT
TTTCTTTGTTTTGTTTTTTTTGTTTTTTTTGTTTTTTGATGGTTTTTTTT
TTTTTTTTCTTTATCTTTTTTTTCCGCTTTACTTTCCCCCTCCTTTTTTT
TAATTAAAAATTTACTTTTCAGATTATGTCCATTAATTTTTTTTTATCCT
TTATAGTCTTTTTAATACTTATATCGACCTTTTTTCTATTTTTT

Query= MSMg01no452_l20.b1 MSMg01no452_l20.b1 CHROMAT_FILE:
MSMg01no452_l20.b1 PHD_FILE: MSMg01no452_l20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:23:23 2005
         (647 letters)



>mm_chr5_15699045_15700091
          Length = 1047

 Score = 1203 bits (622), Expect = 0.0
 Identities = 637/642 (99%)
 Strand = Plus / Plus

                                                                       
Query: 6   aattcactactttaatttgagcttttatattttgtttcactgtgatgattttctgaaatt 65
           ||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 206 aattcactacaataatttgagcttttatattttgtttcaccgtgatgattttctgaaatt 265

                                                                       
Query: 66  gatagtgattaattgggagatgatctgctcataacagaatgaaataaattaatgtgattt 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gatagtgattaattgggagatgatctgctcataacagaatgaaataaattaatgtgattt 325

                                                                       
Query: 126 ttctgctaggatctcatagtgtggtcaagtgctcttaactgtgatcaggagtcaagaaga 185
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttctgctaggatgtcatagtgtggtcaagtgctcttaactgtgatcaggagtcaagaaga 385

                                                                       
Query: 186 gctttgtgttgtaaaagtcaataggaaggacattagaagtggaagatttaatggattaaa 245
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 386 gctttgtgttgtaaaagtcaataggaaggacattagaagtggaagatttcatggattaaa 445

                                                                       
Query: 246 tattaatggacttgatgattacaaccagagcatcactgacgctccagactgaatcgtgtc 305
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tattaatggacttgatgattacaaccagagcatcactgacgctccagactgaatcgtgtc 505

                                                                       
Query: 306 ctagagcatcagggatgtgcatgctcacttatgagctcaaactcctcagagacttggggc 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctagagcatcagggatgtgcatgctcacttatgagctcaaactcctcagagacttggggc 565

                                                                       
Query: 366 ctgtagaaaataaccaatttatcttctcatattctacttttgccttttttcccagtgtct 425
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ctgtagaaaataaccaatttatcttctcatattctacttttgccttttttcccagtgtct 625

                                                                       
Query: 426 ctggcttctatttattaaattcatctggagcactagaatagctcagaggcagattactat 485
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctggcttctatttattaaattcatctggagcactagaatagctcagaggcagattactat 685

                                                                       
Query: 486 taaagtctataagatgaagaaataaattgggactgctcttaatgctgaaagaaattgatc 545
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 taaagtctataagatgaagaaataaattgggactgctcttaatgctgaaagaaattgatc 745

                                                                       
Query: 546 ctagttgaggtccaagatccaaggaactctgaaataatttaccacttgttgtttcttctt 605
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ctagttgaggtccaagatccaaggaactctgaaataatttaccacttgttgtttcttctt 805

                                                     
Query: 606 gttttgttctaaaaatggtctatactatattttatttgaatc 647
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 gttttgttctaaaaatggtctatactatattttatttgaatc 847


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1047
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1037
Effective search space:   660569
Effective search space used:   660569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)