CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACTTGAAAAAATGTT
CAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTC
CACCTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAG
ATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGG
AGTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGA
AAACTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGCAT
ATATCCAGAAGATGCCCCAACAGGTAAGAAGGACACATGCTCCACTATGT
TCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGC
CCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGA
GTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAAT
GGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGA
AACTCACACAATATGTATTCACTGATAAGTGGATATTAGCCCCAAACCTA
GGATACCCAAGATATAAGATATAATTTGCTAAACACATGAAACTCAAGAA
AAATGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGATTTGGGAACA
AACACCCAGGGAAGGAGT

AATGCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAATATCTAAATATTTTACTTACCTGG
ATTAAACTCAATACTTTAAAATATGATCAAATAGTAGATGCATGATATAA
GAAGAATATGTCTTACATATACCTTCTTCAAGACATGTTGCTGTTATAAA
ATTAATCGAGGTTTTCATTTTCTTTATCAGAGCAAGTGTCTTTGTGTCTG
AAAAATGGTGTGGTATTTGAGCTTAAACTTTATTTAGGTAAGTGTGAACC
ACACAGTATTTGAAGACCTTATATGTTAACCTAGTTGTGCTCTTCCTCCA
GCCTTGAATAAGGTAAAAAAAAAAAAAAAAAAAACAAAAAACAAAAAAAA
AACCTCTGATGGTTTTACAACCTAGGTGGAGTCCTTGCATGGCCTTGCCA
CATTTACATTTTCTATGGTGAGTTGAGGAGCAGACCACCATCTGAGCTTG
TTTTGCAACAGAATTCAGCTGAAACAAAGAAACAGAACCCAGACAAAACA
AAGGATGAGTCTTTGGGTTTTCACCCTATATATACATGCAGGCAGAGCTG
AAAATTAAACTTTGAACCTTGACCAGAGAACCTTTGTCTTGGCTTCATTC
TGCTCTCACCTGCCCATCCTACTTCATTCCCAGCCTCCCTTTCAGTTATA
CCCAGTTCTCCATGGCAGCTGGATGGCTACAGGTGGCTCCTGAATGATGG
GCTGGAACACAAGGGTGGAGGTGGGGGATCAAN

Query= MSMg01no453_m21.g1 MSMg01no453_m21.g1 CHROMAT_FILE:
MSMg01no453_m21.g1 PHD_FILE: MSMg01no453_m21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:24:47 2005
         (632 letters)



>mm_chr5_17589918_17590947
          Length = 1030

 Score =  859 bits (444), Expect = 0.0
 Identities = 484/516 (93%), Gaps = 31/516 (6%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatatctaaatattttacttacctggattaaactcaatactttaaaatatgatcaaatag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 aatatctaaatattttacttacctggattaaactcaatactttaaaatatgatcaaatag 429

                                                                       
Query: 61  tagatgcatgatataagaagaatatgtcttacatataccttcttcaagacatgttgctgt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tagatgcatgatataagaagaatatgtcttacatataccttcttcaagacatgttgctgt 369

                                                                       
Query: 121 tataaaattaatcgaggttttcattttctttatcagagcaagtgtctttgtgtctgaaaa 180
           ||||||||||||||||||||||||    ||||||||||||||||||||||||||||||||
Sbjct: 368 tataaaattaatcgaggttttcat----tttatcagagcaagtgtctttgtgtctgaaaa 313

                                                                       
Query: 181 atggtgtggtatttgagcttaaactttatttaggtaagtgtgaaccacacagtatttgaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atggtgtggtatttgagcttaaactttatttaggtaagtgtgaaccacacagtatttgaa 253

                                                                       
Query: 241 gacct--tatatgttaacctagttgtgctcttcctccagccttgaataaggtaaaaaaaa 298
           |||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gaccttatatatgttaacctagttgtgctcttcctccagccttgaataaggtaaaaaaaa 193

                                                                       
Query: 299 aaaaaaaaaaaacaaaaaacaaaaaaaaaacctctgatggttttacaacctaggtggagt 358
           |||||||                         ||||||||||||||||||||||||||||
Sbjct: 192 aaaaaaa-------------------------tctgatggttttacaacctaggtggagt 158

                                                                       
Query: 359 ccttgcatggccttgccacatttacattttctatggtgagttgaggagcagaccaccatc 418
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 ccttgcatggccttgccacatttacattttctatggtgagttgaggagcagaccaccatc 98

                                                                       
Query: 419 tgagcttgttttgcaacagaattcagctgaaacaaagaaacagaacccagacaaaacaaa 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97  tgagcttgttttgcaacagaattcagctgaaacaaagaaacagaacccagacaaaacaaa 38

                                               
Query: 479 ggatgagtctttgggttttcaccctatatatacatg 514
           ||||| ||||||||||||||||||||||||||||||
Sbjct: 37  ggatgggtctttgggttttcaccctatatatacatg 2


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 632
Length of database: 1030
Length adjustment: 10
Effective length of query: 622
Effective length of database: 1020
Effective search space:   634440
Effective search space used:   634440
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)