Query= MSMg01no455_e22.b1 MSMg01no455_e22.b1 CHROMAT_FILE:
MSMg01no455_e22.b1 PHD_FILE: MSMg01no455_e22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:47 2005
(466 letters)
>mm_chr5_106478547_106479412
Length = 866
Score = 886 bits (458), Expect = 0.0
Identities = 464/466 (99%)
Strand = Plus / Plus
Query: 1 tcttggccagttcaagctaagttgaagttatgttcccacatcaatgattcatcttccaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcttggccagttcaagctaagttgaagttatgttcccacatcaatgattcatcttccaaa 260
Query: 61 cagtaaagttgctgaataaaagtgaaatggagctttcaagtgcctctggccttttctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtaaagttgctgaataaaagtgaaatggagctttcaagtgcctctggccttttctgag 320
Query: 121 tccagcctcccgttggtgccccactgtgcaggagtttcttgttctccgtgtgagctttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tccagcctcccgttggtgccccactgtgcaggagtttcttgttctccgtgtgagctttac 380
Query: 181 cttaaagcaggcacttctgaagcaggccttctcaggtggccagaacctttaaggagaacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttaaagcaggcacttctgaagcaggccttctcaggtggccagaacctttaaggagaacc 440
Query: 241 acggggagcccctctggacacaagtaaggtggagacttgatcaattaatcagcccccggg 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 acggggagcccctctggacacaggtaaggtggagacttgatcaattaatcagcccccggg 500
Query: 301 ttttcttgattgcttactctacaggtctagccctatcccaagtccgttgataagcaggtg 360
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 501 ttttcttgattgcttactctacaggtctagccctatcccaagtccgctgataagcaggtg 560
Query: 361 cattttttttaaaagcataaaggtgaccatgtcttgtggttagactttgtttccttgtac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cattttttttaaaagcataaaggtgaccatgtcttgtggttagactttgtttccttgtac 620
Query: 421 caggttatctgagagacaaaggtgattcatatttcaggggctgtca 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggttatctgagagacaaaggtgattcatatttcaggggctgtca 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 866
Length adjustment: 10
Effective length of query: 456
Effective length of database: 856
Effective search space: 390336
Effective search space used: 390336
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_e22.g1 MSMg01no455_e22.g1 CHROMAT_FILE:
MSMg01no455_e22.g1 PHD_FILE: MSMg01no455_e22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:26:47 2005
(434 letters)
>mm_chr5_106619723_106620556
Length = 834
Score = 725 bits (375), Expect = 0.0
Identities = 410/427 (96%), Gaps = 9/427 (2%)
Strand = Plus / Minus
Query: 1 tgtaccgaaacatgctccaccagtcggctggctctgtaagggctgctgggtctctcttga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tgtaccgaaacatgctccaccagtcggctggctctgtaagggctgctgggtctctcttga 368
Query: 61 ctttgctctgtccctacctatgggaacatgtcagtccttaacatgcttgagacttaccca 120
|||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 367 ctttgctctgtccctacctatggggacatctcagtccttaacatgcttgagacttaccca 308
Query: 121 ggattgtccttcagaagcaaagttagacatggtcagtcgatctgaaagtacatccttgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 ggattgtccttcagaagcaaagttagacatggtcagtcgatctgaaagtacatccttgcc 248
Query: 181 ttctgcaccccagcagccgttctgggaccaagggtggtgatgctgca---------tcca 231
||||||| |||||||||||||||||| ||| || ||||| ||||||| ||||
Sbjct: 247 ttctgcatcccagcagccgttctggggccacggatggtggtgctgcaagggtcgcatcca 188
Query: 232 agtaatgtatgatgtacactcaccacacaaaatatgagggtccgcaaatcaacaccacac 291
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 agtaatgtataatgtacactcaccacacaaaatatgagggtccgcaaatcaacaccacac 128
Query: 292 gtcagaacccttccgagccaagaatgtgtttatttctcacagctgctgtagcaaacaagg 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gtcagaacccttccgagccaagaatgtgtttatttctcacagctgctgtagcaaacaagg 68
Query: 352 acaaactgcatggcttcatataacacatgtgttttctactgtagtttcaaaggccaagag 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 acaaactgcatggcttcatataacacatgtgttttctactgtagtttcaaaggccaagag 8
Query: 412 tccacaa 418
|||||||
Sbjct: 7 tccacaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 434
Length of database: 834
Length adjustment: 9
Effective length of query: 425
Effective length of database: 825
Effective search space: 350625
Effective search space used: 350625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
