CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCTAATGCTTCCACTGGGTGAGATCAAAGAGCCTGCTAAAATCCTCCC
TGACATCTCTGACCCACATTCTCACTCCCATCATCTCATAAGTATTTGAC
TAAAAACATTAATGACAATGTTGAAAATATGGCTTAGAATGAAAGGGAAC
AAAAAGCAAGGACAATATTCTGTAAAACTATTGTAGAACTCCAAACCCCC
AGTAGAGCATGGTTTAAGCTGAAAGAACCAAAACTCATCTATTTTTATTA
TCCTTATGTGTCATACAGGAAAATAAACATGAGGGATGAGCTAGTTAATT
GCCAGTTCATGGTGTTTCCTCCTATCTGAAGGGTATGTGCACATGTGTAC
ACACACACAATCATGAACATACATACATGGATACATAGAGCACATACATA
CCTGCAAACACAGGTGCAAAAATTCATAAACACCTGCATACATACATATG
AATACACATGCATGCATACATGCACATATCCACCCATGAATATACAGTCA
CACACACAAAAACCACTTTCATTTTATACTTGTATAACTCCTAACATTGG
CTGAAATTTTAAAATTAAGATTAGTTTCTTATTGTTGAATAAAATAGCAT
TCTTATTGTTGAGTAAAATAGAACCAACAGTTCAATTTCTTTGATGTTTT
TTGGGAATGTGCCTAATTAAAAATAACTAGGCTC

GATTGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTCCTCAGACTCCTCCTCTTTACCTA
ACTTGTCTGGGTCTATGGATTGTAGTTTAGTAATTTACTTAATGGTTCAT
ATCTACTTATAAGTGAATACATACCATATTTATCTTTCTGGTTCTGGGTT
ACCTCATTCAGGATCATTTCTTTTCTAGTCCTCTCCACTTGCCTGCAAAT
TTCATTGATGCCATCGTTTAACAGCTGTGTATTACTCTATTGTATAAACA
TAGCACTTTTTCTTTATCTACACTTCTGTTGAGGGACAGCTAGGTTGTTT
TCAGTTTCAGCTACTATGAATAAACTGACAATGAACATGGTTGAGCAAAT
GTCCCTGTGGTGGTATGGAACATTCTTTGGGTATATATACACAAGAGTAG
CTAGATCTTGAAGTAGATCTATTCCCAACCCTCTGAGGTCTAGCCATATT
GATTTCTATAATGGCTGTATAAGTTTGCACTCCCATCAGCAACAGAAGAG
TGCTTGCTTTGCTCTGCATCATTGCCAACATGAGCTATAACTTGTATTAT
TTTTGATATATAGTTTCTTGTGATACACACATATATAAACATATATACAT
ATGTATATATACATATTATAGATAGATAGATAGATAGATAGATAGATAGA
TAGATAGATAGATAGATAGATAGTTCCCTG

Query= MSMg01no455_l02.b1 MSMg01no455_l02.b1 CHROMAT_FILE:
MSMg01no455_l02.b1 PHD_FILE: MSMg01no455_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:16 2005
         (626 letters)



>mm_chr5_84753979_84755004
          Length = 1026

 Score = 1172 bits (606), Expect = 0.0
 Identities = 618/622 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcctaatgcttccactgggtgagatcaaagagcctgctaaaatcctccctgacatc 64
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctaaggcttccactgggtgagatcaaagagcctgctaaaatcctccctgacatc 264

                                                                       
Query: 65  tctgacccacattctcactcccatcatctcataagtatttgactaaaaacattaatgaca 124
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 265 tctgacccacattctcactcccatcatctcataagtatctgactaaaaacattaatgaca 324

                                                                       
Query: 125 atgttgaaaatatggcttagaatgaaagggaacaaaaagcaaggacaatattctgtaaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atgttgaaaatatggcttagaatgaaagggaacaaaaagcaaggacaatattctgtaaaa 384

                                                                       
Query: 185 ctattgtagaactccaaacccccagtagagcatggtttaagctgaaagaaccaaaactca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctattgtagaactccaaacccccagtagagcatggtttaagctgaaagaaccaaaactca 444

                                                                       
Query: 245 tctatttttattatccttatgtgtcatacaggaaaataaacatgagggatgagctagtta 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tctatttttattatccttatgtgtcatacaggaaaataaacatgagggatgagctagtta 504

                                                                       
Query: 305 attgccagttcatggtgtttcctcctatctgaagggtatgtgcacatgtgtacacacaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 attgccagttcatggtgtttcctcctatctgaagggtatgtgcacatgtatacacacaca 564

                                                                       
Query: 365 caatcatgaacatacatacatggatacatagagcacatacatacctgcaaacacaggtgc 424
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 565 caatcatgaacatacatacatggatacatagagcgcatacatacctgcaaacacaggtgc 624

                                                                       
Query: 425 aaaaattcataaacacctgcatacatacatatgaatacacatgcatgcatacatgcacat 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaaattcataaacacctgcatacatacatatgaatacacatgcatgcatacatgcacat 684

                                                                       
Query: 485 atccacccatgaatatacagtcacacacacaaaaaccactttcattttatacttgtataa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atccacccatgaatatacagtcacacacacaaaaaccactttcattttatacttgtataa 744

                                                                       
Query: 545 ctcctaacattggctgaaattttaaaattaagattagtttcttattgttgaataaaatag 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctcctaacattggctgaaattttaaaattaagattagtttcttattgttgaataaaatag 804

                                 
Query: 605 cattcttattgttgagtaaaat 626
           ||||||||||||||||||||||
Sbjct: 805 cattcttattgttgagtaaaat 826


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space:   625856
Effective search space used:   625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)