Query= MSMg01no455_l16.b1 MSMg01no455_l16.b1 CHROMAT_FILE:
MSMg01no455_l16.b1 PHD_FILE: MSMg01no455_l16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:19 2005
(496 letters)
>mm_chr5_48787264_48788159
Length = 896
Score = 936 bits (484), Expect = 0.0
Identities = 493/496 (99%)
Strand = Plus / Plus
Query: 1 agcccaatcattttaggttgtgtgttttcccccctgtgtaatgccacctaaattgttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcccaatcattttaggttgtgtgttttcccccctgtgtaatgccacctaaattgttttc 260
Query: 61 taaatttgacagtactcgcagagtttcctgagatgtagagccttggatttttcatctata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaatttgacagtactcgcagagtttcctgagatgtagagccttggatttttcatctata 320
Query: 121 aaatagaagagtattgagaattaggtatctttaagatccttgtgggacctgcatcacaac 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatagaagagtattgagaattcggtatctttaagatccttgtgggacctgcatcacaac 380
Query: 181 gctttctgaaataagagaatgcttttgtcagggtattgtcactcttctagaagtacagtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctttctgaaataagagaatgcttttgtcagggtattgtcactcttctagaagtacagtt 440
Query: 241 gtctgtcttaatacacttaaaagcccagattatgaaatgaaggcagtatttgttctatta 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctgtcataatacacttaaaagcccagattatgaaatgaaggcagtatttgttctatta 500
Query: 301 ttctgtccctaggaataaacattcttgttgcagtttttgttgtttttgcttttcatcagt 360
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 501 ttctgtccctaggaataaacattcttgttgcagtttttgttgtttttgtttttcatcagt 560
Query: 361 gtgttttccaggcatcaggcaatctacttctaaccatccctccctgctcgcattgttcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgttttccaggcatcaggcaatctacttctaaccatccctccctgctcgcattgttcat 620
Query: 421 tcccacctggaagaacgtctccacatgctgtcggggagcatcttccttgaggaccgggta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcccacctggaagaacgtctccacatgctgtcggggagcatcttccttgaggaccgggta 680
Query: 481 tgtgcatttccccatc 496
||||||||||||||||
Sbjct: 681 tgtgcatttccccatc 696
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no455_l16.g1 MSMg01no455_l16.g1 CHROMAT_FILE:
MSMg01no455_l16.g1 PHD_FILE: MSMg01no455_l16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:27:19 2005
(156 letters)
>mm_chr5_48958736_48959290
Length = 555
Score = 271 bits (140), Expect = 2e-77
Identities = 149/152 (98%), Gaps = 1/152 (0%)
Strand = Plus / Minus
Query: 1 ttgttaggcttaggtatataactgattttccagatcctacagagacataatgttgagcca 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ttgttatgcttaggtatataactgattttccagatcctacagagacataatgttgagcca 292
Query: 61 ctgcagctgagaataatggggagtgtaagatgtaggggaggatgagaatatacataggac 120
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ctgcagctgagaatgat-gggagtgtaagatgtaggggaggatgagaatatacataggac 233
Query: 121 tagtgagtgtgataatactaaacatgtgtttt 152
||||||||||||||||||||||||||||||||
Sbjct: 232 tagtgagtgtgataatactaaacatgtgtttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 156
Length of database: 555
Length adjustment: 8
Effective length of query: 148
Effective length of database: 547
Effective search space: 80956
Effective search space used: 80956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
