Query= MSMg01no457_e09.b1 MSMg01no457_e09.b1 CHROMAT_FILE:
MSMg01no457_e09.b1 PHD_FILE: MSMg01no457_e09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:25 2005
(466 letters)
>mm_chr5_65895998_65896861
Length = 864
Score = 835 bits (432), Expect = 0.0
Identities = 457/466 (98%), Gaps = 2/466 (0%)
Strand = Plus / Plus
Query: 1 atccaatcaataccccctagactaagatgtctagaggggaacagtgcaagactaaccagt 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 atccaatcaataccccctagactaagatgtctagaggggaacagtggaagactaaccagt 260
Query: 61 ggcctgaggctcaacagttggacatcttgttaccataacagtttgaaaaatatttttgct 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 ggcctgaggctcaacagttggacatcttgttaccataacagtttgaaaaaaatttttgct 320
Query: 121 ttgttatttaaaacaggttctcactatatgggccaggttagcctcaaattcaaaccttcc 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgttatttaaaataggttctcactatatgggccaggttagcctcaaattcaaaccttcc 380
Query: 181 agcctcaacttcccaaatatgaagattactggaacatgtcagcaagcctagctacatttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agcctcaacttcccaaatatgaagattactggaacatgtcagcaagcctagctacatttc 440
Query: 241 tttttttttttctttatgtgtgtgcctggcaaagcttttacaactatgtgtatgctcttt 300
||||||||| || |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 441 ttttttttt--ctatatgtgtgtgcctggcaaagcttttacaacaatgtgtatgctcttt 498
Query: 301 tgttgtatgctatagacattgtatataaaacggttataaattcccagcaaaggcaggcag 360
|||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 499 tgttgtatgctacagacattgtatataaaatggttataaattcccagcaaaggcaggcag 558
Query: 361 atttctgagttcaaagacaacctggcttacacagtacattccaagcaacctgctgagact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 atttctgagttcaaagacaacctggcttacacagtacattccaagcaacctgctgagact 618
Query: 421 atgtttcattatctgtctcttcttaagaaacagacatccctgggaa 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 atgtttcattatctgtctcttcttaagaaacagacatccctgggaa 664
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 864
Length adjustment: 10
Effective length of query: 456
Effective length of database: 854
Effective search space: 389424
Effective search space used: 389424
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no457_e09.g1 MSMg01no457_e09.g1 CHROMAT_FILE:
MSMg01no457_e09.g1 PHD_FILE: MSMg01no457_e09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:25 2005
(245 letters)
>mm_chr5_66036385_66037029
Length = 645
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%)
Strand = Plus / Minus
Query: 1 agtgagcaagaaatgtatgcaatcaatgctgctggttttatgaatcacaaagttggacct 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 443 agtgagcaagaaatgtatgcaatcaatgctgctggttttatgaatcagaaagttggacct 384
Query: 61 aaatactatatttgtaatgaaaaagagcatgatagttaggcatggtagttcttgtctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 aaatactatatttgtaatgaaaaagagcatgatagttaggcatggtagttcttgtctgca 324
Query: 121 atctcagactttaggagaccagggcaagaaaatcaccatgacttcgtgaccagtctgcta 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 323 atctcagactttaggagaccagggcaagaaaatcaccatgacttcgtgaccagtctgcaa 264
Query: 181 tcagtatcgcgatcctgtttgtttgcttgtctgctgttaataaataaataagacagccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcagtatcgcgatcctgtttgtttgcttgtctgctgttaataaataaataagacagccaa 204
Query: 241 tca 243
|||
Sbjct: 203 tca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
