TCAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAGATCCGCGGAA
TTCTCTAAAATTCCCTGAACTAGGCAGGTTTGGTTGGGAGAGTTTTGATT
ATTGCTTCTGTTTCCTTACGCGTTGTAGAAATATTTTAATAGTTTACTTG
ATCCTGATTTAACTTTGGTAAGTGAGATTTTTCAAGAAAGTCATCCATTT
TGTTAATATTTTTCAATTTTGTGGAGTAAAGACATTTGAAATAAGACCTA
TTGATTCTTTGGATTTCCTCAGGGTCTGTTGTTATATCTCCCTTCTCATT
TCTGATTTTGTTAATTTTTTTACAATCTCTCTGCCTTTTAGTTTGGCTAG
GAGTTCATTTATCTAGTTGATTTTCTCAAAGAACCAGATCTTGGTTTTAT
TGATTCTTTGTATTTTTCTCTTTGCTTTTAATTGATTGATTTTTAACCTA
GAGTTTAATTGTTTCCTGTCCTCCACTCCTCTTGGGTGTGGTTTTTTTTT
ATTTTTTTTATATTATTTTGTTTTGTTTTAATTAATCAATTAATTAATTA
ATTTTAGTGCTCCTAGTTATGCCATTAATTTTCCAGTATGAAAACTCTGC
CAGTTTATTAATGATAAAATTCCGGCGCCTTAAAACCTTTCCTCTTATCT
TCTGTTTTTACCGTGTCCTCCTTAACCTGGGTCTTGTTGTTGCCTTCCTT
TTTTCTTTGTTTTTCTATATATACAGCACTTCCCTTGAACCCTTTCGTTT
TTTGTTCCTT

NNNCCTCTATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTACTGTTGGTCGTATGCCTGAT
TTGGACATAGAAAGCTGAGTTTGTGCCAGGGCCAACTGGTTTGAACTTGG
AGATTGGGAAAAGGTACAGGTATGTTTCATCAGTCTGGGGCTGGGTCCTA
GTTGTGGGACTAGGAGTCAGTGTGGAGATCACAAATGCTGAAAGCCAGAT
AGGGTCAGGTGGATTCCACAAAGTATGTCAGGGCACTAGATGCTATGAAG
AGGCTGGATCTGGTGCAAACTGTCTCTATTCAACCAGAATTAAGAGGGGG
TGATACAGGAGATAATATGAAAGCTACCTATGTATCTTTGATATGGACAA
GCTAGAGGGTTCTTAGAGGCGGAGACAAAATCTTGTTAGTCCCAAAGAAA
AGTAGAGAGGTTAGGATGGTATCAAAAGGACATGGGGTGACCAGGGGTAG
GGAGGGATATTAGAGAGCATAGGAAAGCTACCTGTGTCATGGCACCAGGT
GGGCTTGCTAATAGTTGGCAATGCTTATTTCCTGAGGACATTATGACCTT
AGCTTTGGGAGAAAATTTTGACACTACCTCCCCTATATTCAATTAGATAC
TAAAAAGGATATATTTTTATATTGAACATATGAAGGCAAAAGGCAAATTA
GATAACCTTCCCTTATTATAAGTCTACTAGGA

Query= MSMg01no457_e11.g1 MSMg01no457_e11.g1 CHROMAT_FILE:
MSMg01no457_e11.g1 PHD_FILE: MSMg01no457_e11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:29:26 2005
         (522 letters)



>mm_chr5_51139584_51140511
          Length = 928

 Score =  911 bits (471), Expect = 0.0
 Identities = 512/529 (96%), Gaps = 8/529 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tactgttggtcgtatgcctgatttggacatagaaagctgagtttgtgccagg------gc 54
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||      ||
Sbjct: 728 tactgttggtcatatgcctgatttggacatagaaagctgagtttgtgccagggacattgc 669

                                                                       
Query: 55  caactggtttgaacttggagattgggaaaaggtacaggtatgtttcatcagtctggggct 114
           |||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 668 caactggtttgaacttggagtttgggaaaaggtataggtatgtttcatcagtctggggct 609

                                                                       
Query: 115 gggtcctagttgtgggactaggagtcagtgtggagatcacaaatgctgaaagccagatag 174
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 gggtcctagttgtgggactaggagtcagtgtggagatcacaaatgctgaaagccagatag 549

                                                                       
Query: 175 ggtcaggtggattccacaaagtatgtcagggcactagatgctatgaagaggctggatctg 234
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ggtcaggtggattccacaaagtatgtcagggcactagatgctatgaagaggctggatctg 489

                                                                       
Query: 235 gtgcaaactgtctctattcaaccagaattaagagggggtgatacaggagataatatgaaa 294
           ||||||||| | ||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtgcaaactatttctaggcaaccagaattaagagggggtgatacaggagataatatgaaa 429

                                                                       
Query: 295 gctacctatgtatctttgatatggacaagctagagggttcttaga-ggcggagacaaaat 353
           ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct: 428 gctacctatgtatctttgatatggacaagctagagggttctta-acggcggagacaaaat 370

                                                                       
Query: 354 cttgttagtcccaaagaaaagtagagaggttaggatggtatcaaaaggacatggggtgac 413
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cttgttagtcccaaagaaaagtagagaggttaggatggtatcaaaaggacatggggtgac 310

                                                                       
Query: 414 caggggtagggagggatattagagagcataggaaagctacctgtgtcatggcaccaggtg 473
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 309 caggggtagggagggatattagagagcacaggaaagctacctgtgtcatggcaccaggtg 250

                                                            
Query: 474 ggcttgctaatagttggcaatgcttatttcctgaggacattatgacctt 522
           |||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggcttgctaaaagttggcaatgcttatttcctgaggacattatgacctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 928
Length adjustment: 10
Effective length of query: 512
Effective length of database: 918
Effective search space:   470016
Effective search space used:   470016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)