NGGATCAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTGAATTTCAAAACTAATCCAGAAGGCTTTTTATACAATGT
AGTAAATTTAAAATGGTTTATTATTTTTCTATATTTAAGCTCTCTTAAAC
TAAACTGTCAATTTGGAATAGTCAATCTGAAGAGGCAGGCATTGCACTTT
AGCTTTCTATTCAGTTTTACAAATTTTAAGGAAGACTAAGAATTCTTTAC
TGGCATTGTCACCCATTTGTACTTCTTTAAGTACATGAAGGTAGAACTGT
AAGTAATGACCATTACTGTATTTAGCAGCCAGACTTCATTGTATACAGTT
CTTACCTCATCTTTATGGAAGGGAAAATAGAATGATCAATGCATGAAGCA
GATCAGAGAATTAAGATACCTTTCCTGTGAGCCCAAGAACAAGGCCTCCT
CTTCTCATCTGATTCTTCCTGGATCACTTGGAGGAACCATAGGAAACTTG
AATAGAATCCAAAGTACACTGGTTGAAAACACTATGTGTTTACTTTGTCT
AACACATCCTGGCTTACAAAAAAAAAAAAGGTAGATTTTGCTATCCTTAA
GCCTTTATATTTAAAGCCTTGAGATTTAGGGATGTCTGGGGTTCTTGTCT
TGGTTCTTCTTGGCTTTTCATTGAAATATGAACTTTCTGGTATATTTCCT
TACATTACCCCTTTTTTTCTCTGGCTCTATAAAATATTGTGACTCTTTTT
GATCTTTCCACTCGACATTTT

NNNNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGGTTATCTCTGTACCC
CATTTTAAATAGAGTTATTTGATTTTCTGACACTATTGCATATGCCAGCA
AGATTTTGCTGACAGGACCCTGATATAGCTATTTCTTGTGAGGCTATGCC
AGTGCCCAGCAAATACAGAAGTGGATGCTCACAGTCATCTATTGGATGGA
ACACAGGGCCCCTAAAGAAGGTTCTAGAGAAAGTATCAAGGAGCTAAAGG
GGTCTGCAACCCTATAGGTGAAACAACAATATGAACTAACCAGTACCCCA
CAGAACTGTGTCTCTCGTTGCATATGTAGCAGAGGATGTCCTAGTTGGCC
ATCAATGGGAGGAGAGGCCCTTGGTCTTGGGAAGATCATATGCCCCAGTA
CAGGGAAATGCCAGGGCCAGGAAGAGGGAGTTGGTGAGTTGGTGAGCAGG
GAGTGTTCATCTTTTATGTAATTTTTGGAATATCTTTTGACACCGTTTAT
GCACAAAATCTTCCTATATAAACGTTCTTATTCCTTTTTAAACACTTGCC
CCTCTCTCCCCTTTTTCCTACACCTTTTCCTTAACCTTGGCCTTTTTTCT
GCCATTTTTTTTCCCCCTCTTTTTCCTTTCTTTTTTTTTTTTTTTCCCCT
TTTCCCCTTTCCCAATGTCACTACTTTTGCTCCCCTCTCTTTCTTTTTTC
TTTTTTACTTTCTGCACATCTCTTTGTGCCTTTTTTTT

Query= MSMg01no457_o18.b1 MSMg01no457_o18.b1 CHROMAT_FILE:
MSMg01no457_o18.b1 PHD_FILE: MSMg01no457_o18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:20 2005
         (422 letters)



>mm_chr5_16455013_16455834
          Length = 822

 Score =  762 bits (394), Expect = 0.0
 Identities = 415/422 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagtaaatttaaaatggtttattatttttctatatttaagctctcttaaactaaactgtc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tagtaaatttaaaatggtttattatttttctatatttaagctctcttaaactaaactgtc 563

                                                                       
Query: 61  aatttggaatagtcaatctgaagaggcaggcattgcactttagctttctattcagtttta 120
           ||||||||||| ||||||| |||||| |||||||| ||||||||||||||||||||||||
Sbjct: 562 aatttggaataatcaatctaaagaggtaggcattgtactttagctttctattcagtttta 503

                                                                       
Query: 121 caaattttaaggaagactaagaattctttactggcattgtcacccatttgtacttcttta 180
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 502 caaattttaaggaagactaagaattctttactggcattgtcacccatttgcacttcttta 443

                                                                       
Query: 181 agtacatgaaggtagaactgtaagtaatgaccattactgtatttagcagccagacttcat 240
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 442 agtacatgaaggtagaactgtaagtaatgaccattactgtaattagcagccagacttcat 383

                                                                       
Query: 241 tgtatacagttcttacctcatctttatggaagggaaaatagaatgatcaatgcatgaagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tgtatacagttcttacctcatctttatggaagggaaaatagaatgatcaatgcatgaagc 323

                                                                       
Query: 301 agatcagagaattaagatacctttcctgtgagcccaagaacaaggcctcctcttctcatc 360
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 agatcagaaaattaagatacctttcctgtgagcccaagaacaaggcctcctcttctcatc 263

                                                                       
Query: 361 tgattcttcctggatcacttggaggaaccataggaaacttgaatagaatccaaagtacac 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgattcttcctggatcacttggaggaaccataggaaacttgaatagaatccaaagtacac 203

             
Query: 421 tg 422
           ||
Sbjct: 202 tg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space:   335769
Effective search space used:   335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)