Query= MSMg01no458_d14.b1 MSMg01no458_d14.b1 CHROMAT_FILE:
MSMg01no458_d14.b1 PHD_FILE: MSMg01no458_d14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:45 2005
(661 letters)
>mm_chr5_58450915_58451975
Length = 1061
Score = 1239 bits (641), Expect = 0.0
Identities = 652/659 (98%), Gaps = 7/659 (1%)
Strand = Plus / Minus
Query: 1 tgcctcttagtgatgccagttctgttatttacattctgagcatcagccattttgaactga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 tgcctcttagtgatgccagttctgttatttacattctgagcatcagccattttgaactga 649
Query: 61 aattatccttaataattactgtaacagaatcgtggatactttgttgcacatcaagtcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aattatccttaataattactgtaacagaatcgtggatactttgttgcacatcaagtcact 589
Query: 121 ggagttaagtaagggagtaaaactggcatagagaacagtggcccaaattctcagagtttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ggagttaagtaagggagtaaaactggcatagagaacagtggcccaaattctcagagtttt 529
Query: 181 ggatgggagtgtcttcatctatttttatttcctgctttctcagctgtgtctgaagtgggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 ggatgggagtgtcttcatctatttttatttcctgctttctcagctgtgtctgaagtgggg 469
Query: 241 tatactttgggaacagatctcaaaaagtctcttttgcatatgtgagaaaacttacacctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 tatactttgggaacagatctcaaaaagtctcttttgcatatgtgagaaaacttacacctg 409
Query: 301 tattcatgagcatacttggtacaaagtttagatcttccacttttcatatttgttttcttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tattcatgagcatacttggtacaaagtttagatcttccacttttcatatttgttttcttt 349
Query: 361 gtagctgcttactatattcattaaagatacatagggattatattgtcatgattttaagta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 gtagctgcttactatattcattaaagatacatagggattatattgtcatgattttaagta 289
Query: 421 tatcatattgcttatatatttcttttagtaaaacatgtaaaatattaatagaattaagag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 tatcatattgcttatatatttcttttagtaaaacatgtaaaatattaatagaattaagag 229
Query: 481 aaatccacattaatggatggaaactcattctgtctctgtctttctgtcttcatctctgcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 aaatccacattaatggatggaaactcattctgtctctgtctttctgtcttcatctctgcc 169
Query: 541 tctctgtacctgtctgtctctacccgtctgtctatctatctatctatctatctatctatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 tctctgtacctgtctgtctctacccgtctgtctatctatctatctatctatctatctatc 109
Query: 601 tatctatctatctatctatc----tatctatc---tatctatctatcatctatctatct 652
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 108 tatctatctatctatctatcgatctatctatcatctatctatctatcatctatctatct 50
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 83
Number of extensions: 16
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space: 684201
Effective search space used: 684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_d14.g1 MSMg01no458_d14.g1 CHROMAT_FILE:
MSMg01no458_d14.g1 PHD_FILE: MSMg01no458_d14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:30:45 2005
(315 letters)
>mm_chr5_58290236_58290950
Length = 715
Score = 601 bits (311), Expect = e-176
Identities = 314/315 (99%)
Strand = Plus / Plus
Query: 1 aggctacattactgcccgatgagtaagagcccatctgcggctccctcagcagctgtgtga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggctacattactgcccgatgagtaagagcccatctgcggctccctcagcagctgtgtga 260
Query: 61 gtgtgggcacattctcttcagggacactggcgtcttgtgtgaaatgcagtcgaacgggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 gtgtgggcacattctcttcagggacactggcgtcttgtgtgaaatgcagtcgaactggaa 320
Query: 121 gacttacccctaatgtcacaacgtgacagtgaaatgatgtctgaaccacaaagttaagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacttacccctaatgtcacaacgtgacagtgaaatgatgtctgaaccacaaagttaagca 380
Query: 181 gacagtgagtgttagaacatatcaggatgcattttaagtccgtttcacttcatcaagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gacagtgagtgttagaacatatcaggatgcattttaagtccgtttcacttcatcaagggt 440
Query: 241 gttcccaagaagggttcccctgcttctgttgtcgcctaaaaattgtcttttaagacttct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttcccaagaagggttcccctgcttctgttgtcgcctaaaaattgtcttttaagacttct 500
Query: 301 tttgtttttaattgg 315
|||||||||||||||
Sbjct: 501 tttgtttttaattgg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
