Query= MSMg01no458_k23.b1 MSMg01no458_k23.b1 CHROMAT_FILE:
MSMg01no458_k23.b1 PHD_FILE: MSMg01no458_k23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:21 2005
(392 letters)
>mm_chr5_135350370_135351161
Length = 792
Score = 652 bits (337), Expect = 0.0
Identities = 364/377 (96%), Gaps = 8/377 (2%)
Strand = Plus / Minus
Query: 1 gactatttgatctgaagtaagccctgtaatgagtctcagttacctaccaagttggggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 gactatttgatctgaagtaagccctgtaatgagtctcagttacctaccaagttggggaaa 497
Query: 61 ccgccaaacctggatctcatcctgggttgttcagcataatctactttggctgctgccgac 120
||||||||||||| ||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 496 ccgccaaacctggctctcatcttgggttgttcagtataatctactttggctgctgccgac 437
Query: 121 caggtggatgccctgaaccaactgctcacgccaccacacacagtgccaggcccggtccga 180
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 436 caggtggatgccctgaaccaactgctcacaccaccacacacagtgccaggcccggtccga 377
Query: 181 tgaccatgtgtggtgtcctgtctagggaacgtggcaggtgtctggacgccacgtccccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tgaccatgtgtggtgtcctgtctagggaacgtggcaggtgtctggacgccacgtccccag 317
Query: 241 gcgacttatgtg----gttttagttcccagcagttgattctgtgttcccagccggtccca 296
|||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 316 gcgacttatgtgggcag----agttcccagcagttgattctgtgttcccagccggtccca 261
Query: 297 ctgtcagctgggacagcccctgagccttggaggaggttgtaacacctccctctactgatg 356
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 260 ctgtcagctgggacagcccctgagccttggaggaggttgttacacctccctctactgatg 201
Query: 357 gtgtgtgtgtgtgtgtg 373
|||||||||||||||||
Sbjct: 200 gtgtgtgtgtgtgtgtg 184
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no458_k23.g1 MSMg01no458_k23.g1 CHROMAT_FILE:
MSMg01no458_k23.g1 PHD_FILE: MSMg01no458_k23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:31:21 2005
(214 letters)
>mm_chr5_135131343_135131957
Length = 615
Score = 375 bits (194), Expect = e-109
Identities = 207/214 (96%), Gaps = 5/214 (2%)
Strand = Plus / Plus
Query: 1 tccctttccagagccactgagctacatctcaagccaccccacattaggcagggtttctct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctttccagagccactgagctacatctcaagccaccccacattaggcagggtttctct 260
Query: 61 gtgcagtcctggcctagacctcacagggacctgtctgcctgtctctcagcactcagtgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgcagtcctggcctagacctcacagggacctgtctgcctgtctctcagcactcagtgtg 320
Query: 121 ggccaccacacccagcaccgcacccagccccacattcgcttttttttttttttttttttt 180
||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 ggccaccgcacccagcaccgcacccagccccacattcgctctttttttttttttttttt- 379
Query: 181 ttttccgagacagggtttctctgtgtagccctgg 214
||||||||||||||||||||||||||||||
Sbjct: 380 ----ccgagacagggtttctctgtgtagccctgg 409
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 214
Length of database: 615
Length adjustment: 9
Effective length of query: 205
Effective length of database: 606
Effective search space: 124230
Effective search space used: 124230
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
