AAAATTTCCCCCCCCTANACNACTCACATCCCCNAGAGGACCGCGNAAAT
CTATCTCCGCNNTTGCAGCCTTCCTGATGCTGCANCCCTTTAATATANNT
TCTCATGTTGNGNNGACCCCTAACCATAAAAATTATTTTGNNTGCTACTT
CATAACTGTAATTTTGCTACTTTTACAAATTATATTCAACCACTTTTGAA
AATGNAANTTTGNCAAAGNGGCCATGACTCCCAAATTGANACCCCTCTAT
CCCANNNNAACCGAAAAATGCCCNNCCAAAAGTAGACCCNNCCCNACCCA
AGACNCCCCCTTTAACTATACCCCCNNCCTANNCACCCCGCCCCCCCCCC
CCCCCACACACCAAAACAATAATCCCATTTCTCCCCCTTTCCCCCCTTCC
CCCCCNANNCCTCTANNNNNNNCGACCCCCCCCCAACCACCCAATCCAAA
AACTACCCTCCCACCCAATGTTACACTAATCTATATAAANNNNNTTNNNA
AATACCCACACAACCACACCCTCACCTTTTCATTCTTGTTTTTTTTTTGG
GGGCTTTGATCGTTTTTTGATNTTCGGGCCCCCTCCTNCNTNTTTNCCNC
CNNCCCCCCACCCCCCCTTTTTCTATTTATTTTTTTCTAAAATCTAGGGG
GGGGGGGGGAAACCGCTNTGGTCGTGGGGGGGGAGGGGGGGGGGGGGCTT
CNCCTCCAACTACCAATACCACTCCTAACCACCCCCACACCAANATCTTT
TCCCTCTTTATTTCTTTTTATATTT

TGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCACGTGAATTCTGGAATGCTTTTTAAT
TTTTGCTGGCAATAATGCCATTGCATTGAACCTTCAGTTCAGCACTGAGT
GGTGGATGACAGACACAGTTCATATAGGGCCTCTTCATTCACTCATAAAG
AGGTTCATCGGGTGCCTCTGAGTTCCAGGAACTGCTCTTAAGATGGCAAC
CAAACTAGAGATCCTGTCTTTAGGAAGTACCTTAGAGGAAAGAGACACTA
GGCTGGGGAAAGAGAGCAGGGAAAGCAACAGCCATGGAGAACATGAGACC
GGAGAGTAGGAAGACAGACTGGGATTTTAAGCCGGGCTGGTGAAATAATC
CTCTTGAGGAGGTGGCTTAGCCCATGCTCCCTGGAAAATGGCCCAAGGTG
AGTATCTCATGCTAGCACTTCTCTCAAGCAACAAGTCTCAGTCACAGTAT
TGGTGACACACCTGGGATAGCTGGGTAGGAAGGCATCCTCCCAGACTATC
ACACAGTTGGTTTGACTGCTGCCTGGGATAAAAGCCTCATTTTAAGGGTA
TTTGGATAGACACTCATGAGCATTGATTGTCCCACTGGTAATGGGCTTTG
GCTTTTACCTGTTTTTCTTTATGTGGGGATGTCTCCCTTGGGTAAATCCT
CTTTGCCTTGC

Query= MSMg01no460_f20.g1 MSMg01no460_f20.g1 CHROMAT_FILE:
MSMg01no460_f20.g1 PHD_FILE: MSMg01no460_f20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:33:35 2005
         (445 letters)



>mm_chr5_28412566_28413410
          Length = 845

 Score =  830 bits (429), Expect = 0.0
 Identities = 441/445 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cacgtgaattctggaatgctttttaatttttgctggcaataatgccattgcattgaacct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacgtgaattctggaatgctttttaatttttgctggcaataatgccattgcattgaacct 260

                                                                       
Query: 61  tcagttcagcactgagtggtggatgacagacacagttcatatagggcctcttcattcact 120
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tcagttcagcactgagtggtggatgacagacacagttcatgtagggcctcttcattcact 320

                                                                       
Query: 121 cataaagaggttcatcgggtgcctctgagttccaggaactgctcttaagatggcaaccaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cataaagaggttcatcgggtgcctctgagttccaggaactgctcttaagatggcaaccaa 380

                                                                       
Query: 181 actagagatcctgtctttaggaagtaccttagaggaaagagacactaggctggggaaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actagagatcctgtctttaggaagtaccttagaggaaagagacactaggctggggaaaga 440

                                                                       
Query: 241 gagcagggaaagcaacagccatggagaacatgagaccggagagtaggaagacagactggg 300
           ||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagcagggaaaacaacagtcatggagaacatgagaccggagagtaggaagacagactggg 500

                                                                       
Query: 301 attttaagccgggctggtgaaataatcctcttgaggaggtggcttagcccatgctccctg 360
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attttaagtcgggctggtgaaataatcctcttgaggaggtggcttagcccatgctccctg 560

                                                                       
Query: 361 gaaaatggcccaaggtgagtatctcatgctagcacttctctcaagcaacaagtctcagtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaaaatggcccaaggtgagtatctcatgctagcacttctctcaagcaacaagtctcagtc 620

                                    
Query: 421 acagtattggtgacacacctgggat 445
           |||||||||||||||||||||||||
Sbjct: 621 acagtattggtgacacacctgggat 645


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space:   363225
Effective search space used:   363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)