Query= MSMg01no461_a04.b1 MSMg01no461_a04.b1 CHROMAT_FILE:
MSMg01no461_a04.b1 PHD_FILE: MSMg01no461_a04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:26 2005
(286 letters)
>mm_chr5_117347226_117347911
Length = 686
Score = 458 bits (237), Expect = e-133
Identities = 273/293 (93%), Gaps = 14/293 (4%)
Strand = Plus / Minus
Query: 1 gcagctgttggccaggcatacaatctagagagctcaccacccactcacctagctcttgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gcagctgttggccaggcatacaatctagagagctcaccacccactcacctagctcttgag 320
Query: 61 ggttctctagtggggaaacctttgggaggcaaataaaaaagtctggtacccatcttcaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 319 ggttctctagtggggaaacctttgggaggcaaataaaaaagtctggtacccatcttcgat 260
Query: 121 gtgaaacatcaagggtagtggttttaggctcttactgaaagaccctaccatcctatcttt 180
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 259 gtgaaacatcaagggtagtggctttaggctcttactgaaagaccctaccatcctatcttc 200
Query: 181 gctcgctttctatggctgggataaagaccacaatcaaaagcaacttgaggaggaaaggat 240
||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 199 gcttgctttctatggctgggataaagaccacagccaaaagcaacttgaggaggaaaggat 140
Query: 241 accattttttttt-------gtcaggacaagaggtcaatgcaggaacctggag 286
|||| || |||||||||||||||||||||||||||||||||
Sbjct: 139 acca-------ttgaaggaagtcaggacaagaggtcaatgcaggaacctggag 94
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no461_a04.g1 MSMg01no461_a04.g1 CHROMAT_FILE:
MSMg01no461_a04.g1 PHD_FILE: MSMg01no461_a04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:34:26 2005
(242 letters)
>mm_chr5_117167195_117167836
Length = 642
Score = 468 bits (242), Expect = e-136
Identities = 242/242 (100%)
Strand = Plus / Plus
Query: 1 ctccaatcgatgacaccagatgctgggggaaagggttggggacattcttaccgatataga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctccaatcgatgacaccagatgctgggggaaagggttggggacattcttaccgatataga 260
Query: 61 aacagctgtgctagacactgagctcagcacctggacacagaatatgatgaaccagtgaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aacagctgtgctagacactgagctcagcacctggacacagaatatgatgaaccagtgaga 320
Query: 121 ggccattacaggaacactccactctctgatggtgtatagaaaccagccagttgtcatcga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccattacaggaacactccactctctgatggtgtatagaaaccagccagttgtcatcga 380
Query: 181 gaaaagagcaaagcaggcacggaccagagcggtgagtggtagctaaaccaagtccctctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaaagagcaaagcaggcacggaccagagcggtgagtggtagctaaaccaagtccctctg 440
Query: 241 gt 242
||
Sbjct: 441 gt 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 642
Length adjustment: 9
Effective length of query: 233
Effective length of database: 633
Effective search space: 147489
Effective search space used: 147489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
