Query= MSMg01no462_b13.b1 MSMg01no462_b13.b1 CHROMAT_FILE:
MSMg01no462_b13.b1 PHD_FILE: MSMg01no462_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:58 2005
(327 letters)
>mm_chr5_114638217_114638950
Length = 734
Score = 607 bits (314), Expect = e-178
Identities = 326/334 (97%), Gaps = 7/334 (2%)
Strand = Plus / Plus
Query: 1 taatgaacgtgccatccggttcgtggtcatggtgacgcccgaggatctgaaggccaacgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taatgaacgtgccatccggttcgtggtcatggtgacgcccgaggatctgaaggccaacgc 260
Query: 61 aggtacctgaacttgaccactcggctcaactccatgctatccatctcagccagccctcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggtacctgaacttgaccactcggctcaactccatgctatccatctcagccagccctcac 320
Query: 121 ctcctccaccctgcccagacaggtccctcctggaccctggagctgtaggctctctttcac 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcctccaccctgcccagacagatccctcctggaccctggagctgtaggctctctttcac 380
Query: 181 tgtcttcttcttatgtgctcttttgcatgccggcatgcatatcatccattttaaaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtcttcttcttatgtgctcttttgcatgccggcatgcatatcatccattttaaaatttt 440
Query: 241 aatcaccacacagcgtagca-------ttatggcatcttcaaggagaattaatttttgtt 293
|||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 aatcaccacacagcgtagcaggtgtcattatggcatcttcaaggagaattaatttttgtt 500
Query: 294 cattctcctttcccacttctttctcatccccaca 327
||||||||||||||||||||||||||||||||||
Sbjct: 501 cattctcctttcccacttctttctcatccccaca 534
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 734
Length adjustment: 9
Effective length of query: 318
Effective length of database: 725
Effective search space: 230550
Effective search space used: 230550
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no462_b13.g1 MSMg01no462_b13.g1 CHROMAT_FILE:
MSMg01no462_b13.g1 PHD_FILE: MSMg01no462_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:35:58 2005
(484 letters)
>mm_chr5_114798697_114799580
Length = 884
Score = 866 bits (448), Expect = 0.0
Identities = 475/484 (98%)
Strand = Plus / Minus
Query: 1 tctagtttctcctgataaacaatcccgaggtccgctgatgtggccgggacactcaagaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 684 tctagtttctcctgataaacaatcccgaggtccgctgatgtggccgggactctcaagaag 625
Query: 61 caaaacctggctgaagggcttactgttaccacctccctagggaggacatgctccaggtcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 caaaacctggctgaagggcttactgttaccacctccctagggaggacatgctccaggtcc 565
Query: 121 tgtcaccctgttctctagtatgtcacctgcctgggttatggaagagtttttagaaagtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tgtcaccctgttctctagtatgtcacctgcctgggttatggaagagtttttagaaagtgc 505
Query: 181 ccgagtcacaaaccctttggggagattgcttactgatgtgaggaaccctcctgtcatctg 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 504 ccgagtcacaaaccctttggggagattgcttactgatgtgaggaatcctcctgtcatctg 445
Query: 241 tcactttttttcctgttaccttggacacctgcctggcacctccaggctctgagcagagca 300
||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcactttgattcctgttgccttggacacctgcctggcacctccaggctctgagcagagca 385
Query: 301 tcctctggagcatcaaaggagtccctctcagtaagtctagcatctagtgttcttttctct 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 384 tcctctggagcatcaaaggagtccctctcagtaagtctagcctctagtgttcttttctct 325
Query: 361 tgctttcttgtcttcttctgtgtctaccctgctcctgcactcaagccggcccccggccct 420
||||||||||| |||||||||||||||| |||||||||||||||| ||||||||||||||
Sbjct: 324 tgctttcttgttttcttctgtgtctaccttgctcctgcactcaagacggcccccggccct 265
Query: 421 ccttaacctggctctgcctcctgagattaaaggtatgccatcatggtcagcctgcctctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ccttaacctggctctgcctcctgagattaaaggtatgccatcatggtcagcctgcctctg 205
Query: 481 tgtg 484
||||
Sbjct: 204 tgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
