Query= MSMg01no464_o09.b1 MSMg01no464_o09.b1 CHROMAT_FILE:
MSMg01no464_o09.b1 PHD_FILE: MSMg01no464_o09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:48 2005
(174 letters)
>mm_chr5_100654790_100655363
Length = 574
Score = 211 bits (109), Expect = 2e-59
Identities = 146/159 (91%), Gaps = 3/159 (1%)
Strand = Plus / Plus
Query: 1 tgagcccttgtcaggaaaaaaagaaagtaaaaaggaaagaagagtgatcccagcaccaag 60
|||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 201 tgagcccttgtcaggaaaaaaagaaaataaaaaggaaagaagagtgataacagcaccaag 260
Query: 61 agccatggaatgttgctaacaggcattttgacccaggggccttctcccaccccacccccc 120
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 agccatggaatgttgctaacaggcattttgacccaggggccttctccccccccacccccc 320
Query: 121 --acctctctctctctctctctctctctctctctctctc 157
||| | | | | | | |||||||||||||||||||||
Sbjct: 321 ccaccccacccccccgc-ctctctctctctctctctctc 358
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no464_o09.g1 MSMg01no464_o09.g1 CHROMAT_FILE:
MSMg01no464_o09.g1 PHD_FILE: MSMg01no464_o09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:39:48 2005
(229 letters)
>mm_chr5_100823587_100824216
Length = 630
Score = 342 bits (177), Expect = 8e-99
Identities = 216/229 (94%), Gaps = 1/229 (0%)
Strand = Plus / Minus
Query: 2 aaggcaggaggggagggagggctgactcctgaactctgtcatccacggggtactgtggtg 61
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 430 aaggcaggaggagagggagggctgactcctgaactttgtcatccacggggtactgtggtg 371
Query: 62 catgcctcccgcacttacccgccatgcacacgcacacgcacac-ggacactgaataagtg 120
|||||||||||||||||||||||||||||||||||| |||||| | | ||||||||||||
Sbjct: 370 catgcctcccgcacttacccgccatgcacacgcacatgcacacagaatactgaataagtg 311
Query: 121 aggaaatgtttcaacacacttccctctcttgggtgttgagattttagcacagggccttag 180
|||||||||||||| ||| ||||||||||| |||||||||| || |||||||||||||||
Sbjct: 310 aggaaatgtttcaatacatttccctctcttaggtgttgagagttaagcacagggccttag 251
Query: 181 atgctgggcagggctagatgctgggcctggcctgccagtagacttttat 229
|||||||||||||||| ||||||||||||||||| ||||||||||||||
Sbjct: 250 atgctgggcagggctatatgctgggcctggcctgtcagtagacttttat 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 630
Length adjustment: 9
Effective length of query: 220
Effective length of database: 621
Effective search space: 136620
Effective search space used: 136620
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
