Query= MSMg01no467_d21.b1 MSMg01no467_d21.b1 CHROMAT_FILE:
MSMg01no467_d21.b1 PHD_FILE: MSMg01no467_d21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:02 2005
(349 letters)
>mm_chr5_133056741_133057489
Length = 749
Score = 561 bits (290), Expect = e-164
Identities = 336/356 (94%), Gaps = 8/356 (2%)
Strand = Plus / Minus
Query: 1 tccatagcaagtttgaggctagcttaacctatatgagaccttgtctcaggaacaacaaag 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 564 tccatagcaagtttgaggctagcttagcctatatgagaccttgtctcaggaacaacaaag 505
Query: 61 aaatgagggaagggagtcaacaagaagcagacaggcttgaggaggcctgcctgatatcta 120
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 504 aaatgagggaagggagtcaacaagaagcagacagacttgaggaggcctgcctgataccta 445
Query: 121 agggacca--------gtctataagagagtagctgagaaagcactatggtcccatcagat 172
|||||||| ||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 444 agggaccatcatcccagtctataagagcgtagctgggaaagcactatggtcccatcagat 385
Query: 173 tcacaaggaaatggaagaataagactcctccctacatttgaatgtagaatctccttgtct 232
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 384 tcacaagggaatggaagaataagactcctccctacattagaatgtagaatctccttgtct 325
Query: 233 tagggttttactgctgtgtttagacaccatgaccaaggcaactcttataaggacaacatt 292
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tagggttttactgctgtgaacagacaccatgaccaaggcaactcttataaggacaacatt 265
Query: 293 taattggggctggcttacagattccaaggttcaatccattaccatcaaggtgggag 348
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||
Sbjct: 264 taattggggctggcttacagattccgaggttcagtccattaccatcaaggtgggag 209
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_d21.g1 MSMg01no467_d21.g1 CHROMAT_FILE:
MSMg01no467_d21.g1 PHD_FILE: MSMg01no467_d21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:03 2005
(511 letters)
>mm_chr5_132879877_132880787
Length = 911
Score = 980 bits (507), Expect = 0.0
Identities = 510/511 (99%)
Strand = Plus / Plus
Query: 1 aattcatgaagttaaaattttaaaggctttaaagatgagaggaagagtcacagaaatatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcatgaagttaaaattttaaaggctttaaagatgagaggaagagtcacagaaatatg 260
Query: 61 ctctctaaatagaactgtatactgattggtatactgaatatgttatactatacatatata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctctctaaatagaactgtatactgattggtatactgaatatgttatactatacatatata 320
Query: 121 tactaaaatgcatattcattgacatttgttcatttatgtatttattttggggaaagtgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tactaaaatgcatattcattgacatttgttcatttatgtatttattttggggaaagtgtc 380
Query: 181 tccctatgaagtccaggctgggcctggaagtactgtgaaacctcagctagccttgaactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccctatgaagtccaggctgggcctggaagtactgtgaaacctcagctagccttgaactt 440
Query: 241 aagataatcctcctgcctcattcagaggtatcacatatccatgcaagcaaaagggaagct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagataatcctcctgcctcattcagaggtatcacatatccatgcaagcaaaagggaagct 500
Query: 301 tcagaaagactgagactagttcatcagtacattatcaaagccaagagctgggccatgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagaaagactgagactagttcatcagtacattatcaaagccaagagctgggccatgaat 560
Query: 361 ctaacacctttctgttatacagcattcaatgagtgagtcactgggagaacttgtcactcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctaacacctttctgttatacagcattcaatgagtgagtcactgggagaacttgtcactcc 620
Query: 421 tgaataacctagataagatagtacatgtcatttaaaactggcatgaagttaaaatgttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgaataacctagataagatagtacatgtcatttaaaactggcatgaagttaaaatgttat 680
Query: 481 attaaaaatcatgattctgtacaataactaa 511
||| |||||||||||||||||||||||||||
Sbjct: 681 atttaaaatcatgattctgtacaataactaa 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
