Query= MSMg01no467_m11.b1 MSMg01no467_m11.b1 CHROMAT_FILE:
MSMg01no467_m11.b1 PHD_FILE: MSMg01no467_m11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:45 2005
(277 letters)
>mm_chr5_91628650_91629327
Length = 678
Score = 449 bits (232), Expect = e-130
Identities = 267/279 (95%), Gaps = 3/279 (1%)
Strand = Plus / Plus
Query: 1 tttgtctggnattttcgttttcttttcttttttt-ctttttctctgtcagagtgcccagt 59
||||||||| |||||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 201 tttgtctggtattttctttttcttttcttttttttctttttct-tgtcagagtgcccagt 259
Query: 60 tttgttttctgtttgctttgctttgtttttgctagatagttgattgtttcaagttgaata 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tttgttttctgtttgctttgctttgtttttgctagatagttgattgtttcaagttgaata 319
Query: 120 ctaagttctgtggctggaactaaataatacaatgcattctacgcagactattttatgcct 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 320 ctaagttctgtggctggaactaaataatacaatgcattctacgcagactattccatgcct 379
Query: 180 cttgcttcttggtttttatttgctatgattgtgttcttcttctgtgtcttagacttc-ct 238
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 380 cttgcttcttggtttttatttgctatgattgtgttcttcttctgtgtcttagacaacacc 439
Query: 239 tcattccttagcagggcagatagctcctattgcttaaca 277
||| ||||||||||||||||||||||||||||||||||
Sbjct: 440 tcaacccttagcagggcagatagctcctattgcttaaca 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 678
Length adjustment: 9
Effective length of query: 268
Effective length of database: 669
Effective search space: 179292
Effective search space used: 179292
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no467_m11.g1 MSMg01no467_m11.g1 CHROMAT_FILE:
MSMg01no467_m11.g1 PHD_FILE: MSMg01no467_m11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:45 2005
(428 letters)
>mm_chr5_91826315_91827142
Length = 828
Score = 735 bits (380), Expect = 0.0
Identities = 416/428 (97%)
Strand = Plus / Minus
Query: 1 tttatttgttctaaatcacacatgaaaatggtagagccaccaactgcctagcttacagct 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 628 tttatttgttctaaatcacacatgaaaatggtagagccaacaactgcctagcttacagct 569
Query: 61 agggtacacaaacctttctcctcctttccttggagtgagctgtgtggtccaactgttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 agggtacacaaacctttctcctcctttccttggagtgagctgtgtggtccaactgttctg 509
Query: 121 aatatgaggggatacaggacagatcagctaggagaaaggccaaaggatcttcagcacaga 180
|| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 508 aacatgaggggatacaggacagatcagctaggagaaaggtcaaaggatcttcagcacaga 449
Query: 181 taaatgaagacattttggaggccttggagttgaccccttcctaagtttcttcttagtagt 240
||||| || |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 448 taaatcaacacattttggagggcttggagttgaccccttcctaagtttcttcttagtagt 389
Query: 241 ttgtcctctaggcttctgatggacacagtatttaggtctctgcttggcctatggaatctc 300
|| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 388 ctgccctctaggcttctgatggacacagtatttaggtctctgcttggcctatagaatctc 329
Query: 301 cgcattgttactctttatatttcgggggaatatttgtaaagccatctctatagtttttta 360
|||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 328 cgcattgttactctttatattttgggggaatctttgtaaagccatctctatagtttttta 269
Query: 361 tctcattttcagcacaaaactgaccaaaaatgtagtacaggacaggctctggtctgaaaa 420
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tctcattttcagcacaaaattgaccaaaaatgtagtacaggacaggctctggtctgaaaa 209
Query: 421 aatgagaa 428
||||||||
Sbjct: 208 aatgagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
