Query= MSMg01no475_h21.b1 MSMg01no475_h21.b1 CHROMAT_FILE:
MSMg01no475_h21.b1 PHD_FILE: MSMg01no475_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:17 2005
(449 letters)
>mm_chr5_98900456_98901304
Length = 849
Score = 269 bits (139), Expect = 3e-76
Identities = 142/143 (99%)
Strand = Plus / Plus
Query: 4 gaattctgaacattttttctcccaagaaaacagtttatagggagacttgtggtaggaaat 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattctgaacattatttctcccaagaaaacagtttatagggagacttgtggtaggaaat 263
Query: 64 tactaaagattttagaactgttcttagtcatagttgggtagtacaagtttagggttttat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tactaaagattttagaactgttcttagtcatagttgggtagtacaagtttagggttttat 323
Query: 124 attttattataagttaacatttt 146
|||||||||||||||||||||||
Sbjct: 324 attttattataagttaacatttt 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 849
Length adjustment: 10
Effective length of query: 439
Effective length of database: 839
Effective search space: 368321
Effective search space used: 368321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_h21.g1 MSMg01no475_h21.g1 CHROMAT_FILE:
MSMg01no475_h21.g1 PHD_FILE: MSMg01no475_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:17 2005
(375 letters)
>mm_chr5_99090917_99091688
Length = 772
Score = 648 bits (335), Expect = 0.0
Identities = 364/377 (96%), Gaps = 7/377 (1%)
Strand = Plus / Minus
Query: 1 agcacatgatagggaggtctcccagat--ctcatatccagaagtgggatatgagagtaag 58
|||||||||||||||||||||||| || | |||||||||||||||||||||||||
Sbjct: 572 agcacatgatagggaggtctcccaaatggc-----tccagaagtgggatatgagagtaag 518
Query: 59 ctgtcatccctgggcacagtctctgtaactagccccaaactttctgcttggttattcaac 118
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 517 ctgtcatccctcggcacagtctctgtaactagccccaaactttctgctttgttattcaac 458
Query: 119 ctatgcaagcctactatgtctgtatgcctcagttgtcatgcatagggtacatgcttctat 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ctatgcaagcctactatgtctgtatgcctcagttgtcatgcatagggtacatgcttctat 398
Query: 179 ctacctggactacggctagaccttgggtgtgaatctggagtcttcatgggtaatgtgaag 238
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctacctggactacggccagaccttgggtgtgaatctggagtcttcatgggtaatgtgaag 338
Query: 239 actctcttgtctgttgctggttgtatggagcagacatagctggcacgaagtccccaccac 298
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 337 actctcttgcctgttgctggttgtatggagcagacatagctggcacgaagtcctcaccac 278
Query: 299 tagaagctgtagcttcagtggcatccacgatgcccgtgatggttcctgtgatttaaatag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tagaagctgtagcttcagtggcatccacgatgcccgtgatggttcctgtgatttaaatag 218
Query: 359 aaggttttagggacact 375
|||||||||||||||||
Sbjct: 217 aaggttttagggacact 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 772
Length adjustment: 9
Effective length of query: 366
Effective length of database: 763
Effective search space: 279258
Effective search space used: 279258
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
