Query= MSMg01no475_j12.b1 MSMg01no475_j12.b1 CHROMAT_FILE:
MSMg01no475_j12.b1 PHD_FILE: MSMg01no475_j12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:26 2005
(387 letters)
>mm_chr5_46706177_46706963
Length = 787
Score = 565 bits (292), Expect = e-165
Identities = 325/340 (95%), Gaps = 8/340 (2%)
Strand = Plus / Minus
Query: 1 agtttaacaaggggttaaatgtattcacccctcacaatacatttattaagtcttcaccct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 336 agtttaacaaggggttaaatgtattcacccctcacaatacatttattaagtcttcacctt 277
Query: 61 gtggcaggctaaggtccatagattgaacttacagaagaaagccaatggaaaatttcatcc 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gtggcaggccaaggtccatagattgaacttacagaagaaagccaatggaaaatttcatcc 217
Query: 121 ctactttgaaagctactgttttaattagggttttattgctgtgaagagacactatgacca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ctactttgaaagctactgttttaattagggttttattgctgtgaagagacactatgacca 157
Query: 181 cagcaactttttttttaatatttaaaagtttctttaatttattttttacactccatattt 240
||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 156 cagcaactttttttttaatatttaaaagtttctttaattaaatttttacactccatattt 97
Query: 241 cattcccccctttt----atcaactctccaactgctccacatcccacaccttctccccac 296
||| |||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 catccccccc----cccaatcaactctccaactgctccacatcccacaccttctccccac 41
Query: 297 ccactctgtttccacatagatgcctccattgctcctgatc 336
||||||||||||||||| |||||||||| |||||||||||
Sbjct: 40 ccactctgtttccacatggatgcctccactgctcctgatc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 787
Length adjustment: 9
Effective length of query: 378
Effective length of database: 778
Effective search space: 294084
Effective search space used: 294084
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no475_j12.g1 MSMg01no475_j12.g1 CHROMAT_FILE:
MSMg01no475_j12.g1 PHD_FILE: MSMg01no475_j12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:54:26 2005
(240 letters)
>mm_chr5_46505608_46506246
Length = 639
Score = 424 bits (219), Expect = e-123
Identities = 231/235 (98%), Gaps = 1/235 (0%)
Strand = Plus / Plus
Query: 5 gaaataaaataggactgccacttaaatgacccagtgaccagggatagctgtgtttatttc 64
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaaataaaataggactgccacttaaatgacctagtgaccagggatagctgtgtttatttc 264
Query: 65 tgcaatttgtctttcccttgcgttcactacggtcatctgggtttaatatcccaggctgtg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgcaatttgtctttcccttgcgttcactacggtcatctgggtttaatatcccaggctgtg 324
Query: 125 ggaaatgaaaggcagttcgtatttttttttccttgagattctcaaatttgaattttcagc 184
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||
Sbjct: 325 ggaaatgaaaggcagtttgtatttttttt-ccttgagattctcaaatttgaatttccagc 383
Query: 185 tgtgtatgttcttgctgcacatctgaaattacagcaggatgaacgtgcactgtca 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgtgtatgttcttgctgcacatctgaaattacagcaggatgaacgtgcactgtca 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 639
Length adjustment: 9
Effective length of query: 231
Effective length of database: 630
Effective search space: 145530
Effective search space used: 145530
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
