Query= MSMg01no476_b17.b1 MSMg01no476_b17.b1 CHROMAT_FILE:
MSMg01no476_b17.b1 PHD_FILE: MSMg01no476_b17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:06 2005
(154 letters)
>mm_chr5_97615369_97615922
Length = 554
Score = 253 bits (131), Expect = 3e-72
Identities = 146/151 (96%), Gaps = 2/151 (1%)
Strand = Plus / Plus
Query: 5 gaattcctccttcctctcacagagggctcagcaaatcctttcagct-tgccagtgtttgt 63
|||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 205 gaattcctcccacctctcacagagggctcagcaaatcctttcag-tatgccagtgtttgt 263
Query: 64 gagtcccttagaggacctgcagggactgaggaccagaagggagtgaagaggcacttggac 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gagtcccttagaggacctgcagggactgaggaccagaagggagtgaagaggcacttggaa 323
Query: 124 tatatagtggggttggggtggagttagtctg 154
|||||||||||||||||||||||||||||||
Sbjct: 324 tatatagtggggttggggtggagttagtctg 354
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 154
Length of database: 554
Length adjustment: 8
Effective length of query: 146
Effective length of database: 546
Effective search space: 79716
Effective search space used: 79716
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no476_b17.g1 MSMg01no476_b17.g1 CHROMAT_FILE:
MSMg01no476_b17.g1 PHD_FILE: MSMg01no476_b17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:55:06 2005
(245 letters)
>mm_chr5_97756169_97756813
Length = 645
Score = 474 bits (245), Expect = e-138
Identities = 245/245 (100%)
Strand = Plus / Minus
Query: 1 actccatgggacaggtcatctgaatttccactgatgatcacataaccaggtaacataata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 actccatgggacaggtcatctgaatttccactgatgatcacataaccaggtaacataata 386
Query: 61 caaaactatgacattagtgctcatgtcctgaaccttgaccaagagagacagaagaaacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caaaactatgacattagtgctcatgtcctgaaccttgaccaagagagacagaagaaacat 326
Query: 121 gtaacagcccgaaaagtaaagccattaatttcttcctgtgttactgatcccaagggacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtaacagcccgaaaagtaaagccattaatttcttcctgtgttactgatcccaagggacaa 266
Query: 181 gacctgcagacttgctctccagacatcttctcaggaaacagtactcatggcagggtttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gacctgcagacttgctctccagacatcttctcaggaaacagtactcatggcagggtttgt 206
Query: 241 gttta 245
|||||
Sbjct: 205 gttta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
