Query= MSMg01no481_f10.b1 MSMg01no481_f10.b1 CHROMAT_FILE:
MSMg01no481_f10.b1 PHD_FILE: MSMg01no481_f10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:57 2005
(251 letters)
>mm_chr5_23265171_23265820
Length = 650
Score = 453 bits (234), Expect = e-132
Identities = 243/246 (98%), Gaps = 3/246 (1%)
Strand = Plus / Minus
Query: 5 gaattcctttctcct-acttattaaatattatgtcctttaacattcacctaggaaacagt 63
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaattcctttct-ctcacttattaaatattatgtcctttaacattcacctaggaaacagt 390
Query: 64 gaataagagcttttgcatgtagcagacatacagatggaaggatggtataaatagatgccg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaataagagcttttgcatgtagcagacatacagatggaaggatggtataaatagatgccg 330
Query: 124 tagaagagcattagataagcaaaatccccgagactcagacaaatatcacatctccccttg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 tagaagagcattagataagcaaaatccccgagactcagacaaatatcacatctccccttg 270
Query: 184 ctatacgcagtttaaagttgtttctgtgtgtgttgggngggggggggttgtcatgggagg 243
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 269 ctatacgcagtttaaagttgtttctgtgtgtgttggg-gggggggggttgtcatgggagg 211
Query: 244 gaagga 249
||||||
Sbjct: 210 gaagga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 650
Length adjustment: 9
Effective length of query: 242
Effective length of database: 641
Effective search space: 155122
Effective search space used: 155122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no481_f10.g1 MSMg01no481_f10.g1 CHROMAT_FILE:
MSMg01no481_f10.g1 PHD_FILE: MSMg01no481_f10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:01:57 2005
(620 letters)
>mm_chr5_23124144_23125163
Length = 1020
Score = 1191 bits (616), Expect = 0.0
Identities = 619/620 (99%)
Strand = Plus / Plus
Query: 1 cagaatcagccaagcactgtgacggccgccattaatcccagcacttaggaggcagaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaatcagccaagcactgtgacggccgccattaatcccagcacttaggaggcagaggca 260
Query: 61 ggtagatctctgtgggttcaaggacagcctggtctacagggcaagtgtccagggccgtta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtagatctctgtgggttcaaggacagcctggtctacagggcaagtgtccagggccgtta 320
Query: 121 cacagagaaatctgttggggatgtaggaggggggtaattcaaaaaacaaacctccagtgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacagagaaatctgttggggatgtaggaggggggtaattcaaaaaacaaacctccagtgg 380
Query: 181 ggctggagagatggctcagtggttaagagcaccgactgctcttgcagcagacgtcctgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggctggagagatggctcagtggttaagagcaccgactgctcttgcagcagacgtcctgag 440
Query: 241 ttcaattcccagctcccacatggtgtctcccaagcatctgtagtgggatccgacgccctc 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttcaattcccagcacccacatggtgtctcccaagcatctgtagtgggatccgacgccctc 500
Query: 301 ttctggtgtctgaaggcagtgcactcacacataaaatgagcatgggaaaccttgcacctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctggtgtctgaaggcagtgcactcacacataaaatgagcatgggaaaccttgcacctg 560
Query: 361 ccctgcactgaagcagctccttttactctcagccttctgagtaacaggatgctctccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccctgcactgaagcagctccttttactctcagccttctgagtaacaggatgctctccaca 620
Query: 421 ccgacggccatctgtctgtcaatctttaccggcttttctggcctacttcacaacagtgtt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccgacggccatctgtctgtcaatctttaccggcttttctggcctacttcacaacagtgtt 680
Query: 481 cctcatgagtctttgtaaatttaatttcatctataaaatggtttaaaactccaatctgct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cctcatgagtctttgtaaatttaatttcatctataaaatggtttaaaactccaatctgct 740
Query: 541 tttaccatccatcacctttacaaccatgccccactccattcccacaactcacgaagtcct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttaccatccatcacctttacaaccatgccccactccattcccacaactcacgaagtcct 800
Query: 601 accttcatcaccacttggcc 620
||||||||||||||||||||
Sbjct: 801 accttcatcaccacttggcc 820
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
