TTGTTTGACTTATAATTGCGGCCGNAAANGAATCACAATCGTTATCGGGC
GNGGAANNCNTTTTTTCCATACAAGGGCATTTTTGAAAAGGTTATTTGAA
TTTCTGGAGTCCAGTTTTTTGCGCTCTTTTTATATATTGGATATTAGTCC
TCTATCAGATTTATGATTGGTAAAAGTTCTTTCCCAATCTGTTGGTGGCC
TTTTTATCTTATTGACAGTTCTTTTGCCCTACAGAAGCTTTGCAATTTTA
TTTTGTCCCATTTGTTGATTCTTGATCTGACAGCACAAGCCATTGCTGTT
CTGTTCAGGAATTTTTCCCTTGNGTTCATATCTTCGAGGGTTTCCCCCAC
TTTCTCCTCTATAAATTTCAGTGTCTCCGGTTTTATGTGGAGTTCTTTGA
TCCACTTAGACTTGACGCTTTTTACTATAAGATAAGAATGGATCAATTTT
GCATTTCTTCCCACCAGAAATAACCTTCCCGGTTTGGTGGCCCTCACCCC
CCTNTTTCCCTTTTAGTTCCTTTTCCTCCCCTATTCCTCGTTTTTTTTCC
AACCTCCTCTCCTTTTTTTTTATTTTTTCACCCCCCTCTTTTTTACCTTA
CTCCATTTTTTATCCGTTTCCCTCGTCCGCCGTTTTTTTCGTCCCTTTGT
TTTAATCTTCCCCCATTTTTTTATCTACTTCGTCCTTTTTCCCTTCGCCT
CTCTTTTTGTACCGTAACTTTTTTTTCTGCTCCTCCCCCGC

CCCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGGCTAGCCTGGTCTACA
AAGCAAGTTCCAGGCCAGCCAAGGCTGCCTGTTTGGGGCAGGTGTTGGTG
GTAGTAGAGAACTGAACTGGTAGGGGTCAGGGTTACAGTCACATACAAGC
CAGACTCAAACCCATTTGCAGGATAAGTTCCAAATTGAGCAAAATATGAG
AATTTTTAACTGCTTATTGCCAAGAACTGATGCCCATATGTATCCATAAA
TTGACTGATTAGTAGCTACTAATGTTTTTTAGTACTATACAGACAGGTAG
GTGCTGGAAGAATCCAGTTATTTTATGCCTCAGTTCCAGGGGGAGGATTT
ACATGGGAACTAAATGTCATACACACATCCATGATGAACCTTGTGAGAGG
TGATGGCAGGTGCCTACTGGAAAAATTACAGAACAAGGTTTCTCAGGGTT
GGTACTGCTGCCATATAGAACTAGGTAGCTCTTTGTTTTAGGGGTATTAT
TGTGCATTGCAAGATGTTTTGCAGCACAGAAGCCCTCAGACCCCTGGAAC
CTTTCCAGGCAGTGCCAATTGTACCCTGGGAAGTGAACACATGGAGAGGT
TTCAATGGAGAGCAACCACTAACAGGTCTGCACCTGTGTGAACTAGTGAG
CCCTTTGCCTCCCCTGCTTCTCTGAAGGCCTGATTTGAAATTCCTCCT

Query= MSMg01no484_o04.g1 MSMg01no484_o04.g1 CHROMAT_FILE:
MSMg01no484_o04.g1 PHD_FILE: MSMg01no484_o04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:37 2005
         (640 letters)



>mm_chr5_85686923_85687962
          Length = 1040

 Score = 1183 bits (612), Expect = 0.0
 Identities = 633/640 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaggctagcctggtctacaaagcaagttccaggccagccaaggctgcctgtttggggcag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggctagcctggtctacaaagcaagttccaggccagccaaggctgcctgtttggggcag 260

                                                                       
Query: 61  gtgttggtggtagtagagaactgaactggtaggggtcagggttacagtcacatacaagcc 120
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgttggtggtagtaaagaactgaactggtaggggtcagggttacagtcacatacaagcc 320

                                                                       
Query: 121 agactcaaacccatttgcaggataagttccaaattgagcaaaatatgagaatttttaact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agactcaaacccatttgcaggataagttccaaattgagcaaaatatgagaatttttaact 380

                                                                       
Query: 181 gcttattgccaagaactgatgcccatatgtatccataaattgactgattagtagctacta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttattgccaagaactgatgcccatatgtatccataaattgactgattagtagctacta 440

                                                                       
Query: 241 atgttttttagtactatacagacaggtaggtgctggaagaatccagttattttatgcctc 300
           ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgttgtgtagtactatacagacaggtaggtgctggaagaatccagttattttatgcctc 500

                                                                       
Query: 301 agttccagggggaggatttacatgggaactaaatgtcatacacacatccatgatgaacct 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 501 agttccagggggaggatttacatgggaactaaatgtcatacacacatccatgataaacct 560

                                                                       
Query: 361 tgtgagaggtgatggcaggtgcctactggaaaaattacagaacaaggtttctcagggttg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtgagaggtgatggcaggtgcctactggaaaaattacagaacaaggtttctcagggttg 620

                                                                       
Query: 421 gtactgctgccatatagaactaggtagctctttgttttaggggtattattgtgcattgca 480
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 gtactgctgccatatagaactaggtagctctttgttttaggggtattactgtgcattgca 680

                                                                       
Query: 481 agatgttttgcagcacagaagccctcagacccctggaacctttccaggcagtgccaattg 540
           ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 681 agatgttttgcagcacagaagccctcagacccctgcaacctttctaggcagtgccaattg 740

                                                                       
Query: 541 taccctgggaagtgaacacatggagaggtttcaatggagagcaaccactaacaggtctgc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taccctgggaagtgaacacatggagaggtttcaatggagagcaaccactaacaggtctgc 800

                                                   
Query: 601 acctgtgtgaactagtgagccctttgcctcccctgcttct 640
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acctgtgtgaactagtgagccctttgcctcccctgcttct 840


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space:   648900
Effective search space used:   648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)