NNNAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCAAGAGATCGTGGCCAAAAGATTTCAATTTCAACAGCCTC
TTCAGTTACATAGAAAGCTCAACACCAGCCTATGCTAAATGAATCTCTGT
TTCAAGAGAGCAAATCAAATTAGAGCAGGCATTATAATATCCTGACATTG
TGTTAAACACATTTGATTCTTATTCTGTTTTCAATGTTTGAAATATAGTT
TATGTGATAGACAAATAATTTAATTCTCCACTAATTGTTTAATTGTTTTG
CCAATTAATTTGGGAAATGCAACATTACATTGTGAGCCATACAAGGACAG
AGCCATGACTGTCCAATTTCATTGAATAACATCATCTGGCACCTGGGTAA
CTTAGTGAGAAACAGAGTGATTGATAGTACCTATAGCACTTAGAAACATT
TAATAGTTGGATATTCATCAGAAACAGTGAACACGTGTATGACTGTTTCT
ACCTCTGTCAAGTTACTTCGTCAACCTGGACTTGGACTGAATCCCTTTGT
CCATACATTTCCTATCGGAATGAATAAATGTTCTACCTAAGAAAAGCATC
CTGACACATGGCCTTTCAGATTGTGGAAGAGTCTTGGGATTTTTGTAGAA
TTTTGATTTTATTGGGACAATATGACCAAATATCTAACAAAACTATAAAA
CTTAAAAGTTATTGAAGCATACCGTGAAACACATAGATATAATTTT

ATTACTCTCCAAATCTCTAATCCTAACAACCTATCTCTCCTTATACTACA
CCTTCATCCTCTCTCCTCCTTTTATTTAACTCTCTCTTCACCATCTACAT
AATTCCTTTCATACTCTCTTATTCCCAATTATTCTTTTCAACCAANCCAA
CCTATTACTACCCTCTTCATACTCTAANATTCCAACTCTCATTAACT

Query= MSMg01no485_b03.b1 MSMg01no485_b03.b1 CHROMAT_FILE:
MSMg01no485_b03.b1 PHD_FILE: MSMg01no485_b03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:06:53 2005
         (695 letters)



>mm_chr5_58613156_58614249
          Length = 1094

 Score = 1313 bits (679), Expect = 0.0
 Identities = 688/691 (99%), Gaps = 1/691 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaagagatcgtggccaaaagatttcaatttcaacagcctcttcagttacatagaa 64
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaagagatcg-ggccaaaagatttcaatttcaacagcctcttcagttacatagaa 263

                                                                       
Query: 65  agctcaacaccagcctatgctaaatgaatctctgtttcaagagagcaaatcaaattagag 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agctcaacaccagcctatgctaaatgaatctctgtttcaagagagcaaatcaaattagag 323

                                                                       
Query: 125 caggcattataatatcctgacattgtgttaaacacatttgattcttattctgttttcaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caggcattataatatcctgacattgtgttaaacacatttgattcttattctgttttcaat 383

                                                                       
Query: 185 gtttgaaatatagtttatgtgatagacaaataatttaattctccactaattgtttaattg 244
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtttgaaatatagattatgtgatagacaaataatttaattctccactaattgtttaattg 443

                                                                       
Query: 245 ttttgccaattaatttgggaaatgcaacattacattgtgagccatacaaggacagagcca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ttttgccaattaatttgggaaatgcaacattacattgtgagccatacaaggacagagcca 503

                                                                       
Query: 305 tgactgtccaatttcattgaataacatcatctggcacctgggtaacttagtgagaaacag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tgactgtccaatttcattgaataacatcatctggcacctgggtaacttagtgagaaacag 563

                                                                       
Query: 365 agtgattgatagtacctatagcacttagaaacatttaatagttggatattcatcagaaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtgattgatagtacctatagcacttagaaacatttaatagttggatattcatcagaaac 623

                                                                       
Query: 425 agtgaacacgtgtatgactgtttctacctctgtcaagttacttcgtcaacctggacttgg 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtgaacacgtgtatgactgtttctacctctgtcaagttacttcgtcaacctggacttgg 683

                                                                       
Query: 485 actgaatccctttgtccatacatttcctatcggaatgaataaatgttctacctaagaaaa 544
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 684 actgaatccctttgtccatacatttcctatcagaatgaataaatgttctacctaagaaaa 743

                                                                       
Query: 545 gcatcctgacacatggcctttcagattgtggaagagtcttgggatttttgtagaattttg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gcatcctgacacatggcctttcagattgtggaagagtcttgggatttttgtagaattttg 803

                                                                       
Query: 605 attttattgggacaatatgaccaaatatctaacaaaactataaaacttaaaagttattga 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 attttattgggacaatatgaccaaatatctaacaaaactataaaacttaaaagttattga 863

                                          
Query: 665 agcataccgtgaaacacatagatataatttt 695
           |||||||||||||||||||||||||||||||
Sbjct: 864 agcataccgtgaaacacatagatataatttt 894


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1094
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1084
Effective search space:   742540
Effective search space used:   742540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)