Query= MSMg01no486_c03.b1 MSMg01no486_c03.b1 CHROMAT_FILE:
MSMg01no486_c03.b1 PHD_FILE: MSMg01no486_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:21 2005
(203 letters)
>mm_chr5_93151379_93151981
Length = 603
Score = 391 bits (202), Expect = e-113
Identities = 202/202 (100%)
Strand = Plus / Plus
Query: 2 gagccatgacttttgaggaaagggcatgtagagcagcaataccactcgatattctgaggg 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 gagccatgacttttgaggaaagggcatgtagagcagcaataccactcgatattctgaggg 261
Query: 62 ccctgcatcttggcacacctgacatgtttatacgttaggacagaagcctaagtggccagc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccctgcatcttggcacacctgacatgtttatacgttaggacagaagcctaagtggccagc 321
Query: 122 aagaatggcattgcacagcctggccatgctaggccctggggacaactcaagagctctagc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aagaatggcattgcacagcctggccatgctaggccctggggacaactcaagagctctagc 381
Query: 182 ttttcctcagaggtgtgatggg 203
||||||||||||||||||||||
Sbjct: 382 ttttcctcagaggtgtgatggg 403
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 603
Length adjustment: 8
Effective length of query: 195
Effective length of database: 595
Effective search space: 116025
Effective search space used: 116025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no486_c03.g1 MSMg01no486_c03.g1 CHROMAT_FILE:
MSMg01no486_c03.g1 PHD_FILE: MSMg01no486_c03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:21 2005
(628 letters)
>mm_chr5_93324138_93325164
Length = 1027
Score = 1172 bits (606), Expect = 0.0
Identities = 621/626 (99%), Gaps = 1/626 (0%)
Strand = Plus / Minus
Query: 3 agcctgttattgaaaagaatattaatgaagaaattttacagcttgagaaagttacagtat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 agcctgttattgaaaagaatattaatgaagaaattttacagcttgagaaagttacagtat 768
Query: 63 ttgatgagaaatttttataagaaatttatatgtcttatcttataagaaaaagacaagaca 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 ttgatgagaaatttttataagaaatttatatgtcttatcttataagaaaaagacaagaca 708
Query: 123 gccagtcctaagaaagtctagtgtacaaactgctatttgcacagtttttaaaaatatatt 182
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 707 gccagtcctaagaaagtctagtgtacaaactgctatttgcacagttttt-aaaatatatt 649
Query: 183 aatagagataaaattcacatgtgttgaaatgtaaaacaaacaaacaacgcacactatttg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 aatagagataaaattcacatgtgttgaaatgtaaaacaaacaaacaacgcacactatttg 589
Query: 243 cattcttccctccccaaagtcttcaatattggaatagattttaaaagaccagaaaagctg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 cattcttccctccccaaagtcttcaatattggaatagattttaaaagaccagaaaagctg 529
Query: 303 agataactccccatccagaagtggggagcaccaggtccctaaatgtgctgagagggcagg 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 agataactccccatccagaagtggggagcaccaggtccctaaatgtgctgagagggcagg 469
Query: 363 agttgtgagttaagtaggctcatggctgccagtccagccacttcctgcagtgacaggtca 422
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 468 agttgtgagttaagtaggctcatggctgccagtccagccacttcaggcagtgacaggtca 409
Query: 423 ggtcactttctgccatctcaaatatttccacctacaaaccctaactttcagtgggaggta 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 ggtcactttctgccatctcaaatatttccacctacaaaccctaactttcagtgggaggta 349
Query: 483 aataaaatatgtctgataacaaaatatgtccaatcacatcaaatcacggtaggctatctg 542
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 348 aataaaatatgtctgataacaaaatatgtccaatcacatcaaatcatggtaggctatctg 289
Query: 543 agggtctaaagtgatgtgggaggcagggtccctgtgagatagatggtttaatgggtaatg 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 288 agggtctaaagtgatgtgggaggcagggtccctgtgagatagatggtttaatgggtaaag 229
Query: 603 ttctcgctgtgcagattggacaacct 628
||||||||||||||||||||||||||
Sbjct: 228 ttctcgctgtgcagattggacaacct 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1027
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1017
Effective search space: 628506
Effective search space used: 628506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
