NNNNNAATCTATAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCXXXXX
XXXXXXXXXXXXXXGCCCATTCTCTCAACATAATAAAAGCAATCTACAGC
AAACCAGTAGCCAACATCAAAGTAAATGGAGAGAAGCTGGAAGCAATCCC
ACTAAAATCAGGGACTAGACAAGGCTGCCCACTTTCTCCCTACCTTTTCA
ACATAGTACTTGAAGTATTAGCCAGAGCAATTCGACAACAAAAGGAGATC
AAGGGGATACAAATTGGAAAAGAGGAAGTCAAAATATCACTTTTTGCAGA
TGATATGATAGTATATATAAGTGACCCTAAAAATTCCACCAGAGAACTCC
TAAACCTGATAAACAGCTTTGGTGAAGTAGCTGGGATATAAAATTTAAAC
TCAAACCAAGTCCATGGGCCTTTTCTCCTAACCCAAAGAAATAAAAAAGG
GCGGGAAAAAAAAAAAATTTGGGGAAAACCCCCCCCTTTCCAATAAGCCC
CAAAAAATATAAAAAAATCCCGGGGGGGGGCTCTTAATAAGGAAAAAAAA
AAAATTTGGGTGTGAAAAAAAACTTTTCAGCTCCCCCGGGGGGGGAAAAA
TTTTTATGAGAAAAACCCTCCCAAAAAAAGGGGGGGAGAACCCCCCCCCC
CGCGCCCCTCCGAGGGAGGGGGGGGGGCGGCGACCACCACCTTTTGTGAA
AAAAAAGGGTGTTTTTTTTTGTGGTGGGAAAAAAAAGAAAATTA

NNCCAATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATATATCCATTTTTAGAATG
ATTAAAATAAACACAGATCCAAAGAAGTAACAAATATATATCAAATAATG
AACAGAGACATAGGACAAAAAGACCACAAACAGACACACAAGTAAGAAAC
TTGATTTGGTTCAAAATTCAAGATCAGTGACAATGACAAGAGCAAAACTC
TTCCACAGATAGGCATTTGGAGGTGAGTTTATTATAGGTAAAGAGTAACT
ATAATGCAAAATAAATATAATTATGAAAAGGTAAACAAATGCACACTACA
CTCATACCTAGTATAAATCCAAATGTTACATAAAGCATGAGGTAGGAAGA
AGTGCTCAAAGTAATGAAGGGGAATCAAACTTCTGTCTTCATGGGCTTTG
TCACATTTATTTTGTCTTTGAAGTTGCCTAGATTCACCTCCAGTAGATAG
ACAGGACCTCAAGTGGAGGGACAGGGTTATTAACTCACAGTCAAAATTAC
TCACCCAGAATTGTTCCTGTCTAAAAGAACTGCAGGGACAAAAATGGAGA
AGAGACTGAAGGAAAAGAGGTCCAATGATTGGCACAACTTGGAATCCATC
TCATGGGGGGACATCAAGTCCTGACACTATTACTGATGCTATGATGTGCT
TGCAAACAGTAGCCTGGCATGGCTGTCCTCAGAGAGGCTCTACTAGCAGC
AGACTGAGACATCN

Query= MSMg01no486_d05.g1 MSMg01no486_d05.g1 CHROMAT_FILE:
MSMg01no486_d05.g1 PHD_FILE: MSMg01no486_d05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:26 2005
         (616 letters)



>mm_chr5_79135383_79136398
          Length = 1016

 Score = 1170 bits (605), Expect = 0.0
 Identities = 614/617 (99%), Gaps = 2/617 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catatatccatttttagaatgattaaaataaacacagatccaaagaagtaacaaatatat 60
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 catatatccatttttagaatgagtaaaataaacacagatccaaagaagtaacaaatatat 260

                                                                       
Query: 61  atcaaataatgaacagagacataggacaaaaagaccacaaacagacacacaagtaagaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaaataatgaacagagacataggacaaaaagaccacaaacagacacacaagtaagaaa 320

                                                                       
Query: 121 cttgatttggttcaaaattcaagatcagtgacaatgacaagagcaaaactcttccacaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttgatttggttcaaaattcaagatcagtgacaatgacaagagcaaaactcttccacaga 380

                                                                       
Query: 181 tagg-catttggaggtgagtttattataggtaaagagtaactataatgcaaaataaatat 239
           | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 t-ggacatttggaggtgagtttattataggtaaagagtaactataatgcaaaataaatat 439

                                                                       
Query: 240 aattatgaaaaggtaaacaaatgcacactacactcatacctagtataaatccaaatgtta 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aattatgaaaaggtaaacaaatgcacactacactcatacctagtataaatccaaatgtta 499

                                                                       
Query: 300 cataaagcatgaggtaggaagaagtgctcaaagtaatgaaggggaatcaaacttctgtct 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 cataaagcatgaggtaggaagaagtgctcaaagtaatgaaggggaatcaaacttctgtct 559

                                                                       
Query: 360 tcatgggctttgtcacatttattttgtctttgaagttgcctagattcacctccagtagat 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tcatgggctttgtcacatttattttgtctttgaagttgcctagattcacctccagtagat 619

                                                                       
Query: 420 agacaggacctcaagtggagggacagggttattaactcacagtcaaaattactcacccag 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agacaggacctcaagtggagggacagggttattaactcacagtcaaaattactcacccag 679

                                                                       
Query: 480 aattgttcctgtctaaaagaactgcagggacaaaaatggagaagagactgaaggaaaaga 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aattgttcctgtctaaaagaactgcagggacaaaaatggagaagagactgaaggaaaaga 739

                                                                       
Query: 540 ggtccaatgattggcacaacttggaatccatctcatggggggacatcaagtcctgacact 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggtccaatgattggcacaacttggaatccatctcatggggggacatcaagtcctgacact 799

                            
Query: 600 attactgatgctatgat 616
           |||||||||||||||||
Sbjct: 800 attactgatgctatgat 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)