Query= MSMg01no490_d12.b1 MSMg01no490_d12.b1 CHROMAT_FILE:
MSMg01no490_d12.b1 PHD_FILE: MSMg01no490_d12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:45 2005
(634 letters)
>mm_chr5_24541835_24542868
Length = 1034
Score = 1149 bits (594), Expect = 0.0
Identities = 624/634 (98%), Gaps = 1/634 (0%)
Strand = Plus / Plus
Query: 1 cccatgagccgtgcctgtggatgcagagacatctctaatctgatttagttgctttatcga 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 cccatgagccgtgcctgtggatgcagagacgtctctaatctgatttagttgctttatcga 260
Query: 61 ctttccccttctgttcccctccttaaagtcaccgtcaaattgagaaccttgaggctcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttccccttctgttcccctccttaaagtcaccgtcaaattgagaaccttgaggctcttc 320
Query: 121 ccagacattatttttattaaagtacatttagacttttgattcattttgaattatttttaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccagacattatttttattaaagtacatttagacttttgattcattttgaattatttttaa 380
Query: 181 tatggtatcaagtaactgtgccactttgtccttttgcaagtgggtgttcagtttctcctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatggtatcaagtaactgtgccactttgtccttttgcaagtgggtgttcagtttctccag 440
Query: 241 ttttgtttgttgaaaatatggccctttcctcattgaaatgtcctggcacactcacccaaa 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttctgtttgttgaaaatatggccctttcctcattgaaatgtcctggcacactcacccaaa 500
Query: 301 gtctactgcaggctagagggagggttcagtgggtaaaggcacttgctgcaaagcctgacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtctactgcaggctagagggagggttcagtgggtaaaggcacttgctgcaaagcctgacg 560
Query: 361 gtcttatttgatccctgaaacccatagagtaagggagagatctgatgcctgcaaattgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcttatttgatccctgaaacccatagagtaagggagagatctgatgcctgcaaattgtc 620
Query: 421 ctctgacctccacacgtgccctgtggtgtgtggtatgtgcacacaaacactcaaaataaa 480
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 621 ctctgacctccacacgtgccctgtggtgtgtggtatgtgcacacaaacacacaaaataaa 680
Query: 481 taaatatggtgtaaaaaaaaagtaaattgatcatgttttggggtttctgatgctgtgatg 540
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 taaatatggtgtaaaaaaaa-gtaaattgatcatgttttagggtttctgatgctgtgatg 739
Query: 541 aaacactatggccaaaagcaacttggatatgaaagggtttacctcattttaagtttattc 600
|||||||||| |||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 740 aaacactatgaccaaaagcaacttggatatgaaagggtttacctcatcttaggtttattc 799
Query: 601 tcatcactaagaaagtcaggacaggaactcacac 634
||||||||||||||||||||||||||||||||||
Sbjct: 800 tcatcactaagaaagtcaggacaggaactcacac 833
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no490_d12.g1 MSMg01no490_d12.g1 CHROMAT_FILE:
MSMg01no490_d12.g1 PHD_FILE: MSMg01no490_d12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:13:45 2005
(633 letters)
>mm_chr5_24716386_24717418
Length = 1033
Score = 1110 bits (574), Expect = 0.0
Identities = 619/634 (97%), Gaps = 1/634 (0%)
Strand = Plus / Minus
Query: 1 cagaagattaagactgggagatctcagagttcaaggtcatctggatttaaaggcatggtg 60
||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||
Sbjct: 964 cagaagattaagactgggagatctctgagttcaaggtcatctgggtttaaaggcatggtg 905
Query: 61 gcacgcacctttaatctgggctacaccttctgctggagacctacataagacatttgaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 904 gcacgcacctttaatctgggctacaccttctgctggagacctacataagacatttgaaga 845
Query: 121 aggaagattcactctcttctttgcctgcttgctgtgtgggactgagcaactgctagatcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 844 aggaagattcactctcttctttgcctgcttgctgtgtgggactgagcaactgctagatcc 785
Query: 181 ttgaacttccattcacagctgctactgaccattattgggagttgaactgaaaactataag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 784 ttgaacttccattcacagctgctactgaccattattgggagttgaactgaaaactgtaag 725
Query: 241 tcatctatttattcctttactatgtagagactacccataagttctatgactctagagaac 300
||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 tcatcaataaattcctttactatgtagagactacccataagttctatgactctagagaac 665
Query: 301 cctgacttatacaccaggcttcctctcacagttcattgccctgcaggattccaagtagga 360
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 cctgacttatacactaggcttcctctcacagttcattgccctgcaggattccaagtagga 605
Query: 361 gcttgaaggagaagacattgctgagatatctgtgtctatacagcaagtctatgaggtctg 420
||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct: 604 gcttgaaggagaagacattgctgagatatttgtgactatacagcaagtctatgaggtctg 545
Query: 421 ggctgaaaagagcaaaaatgagt-aaaaaagcactggcgagagggctcagtcacgaaagc 479
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 544 ggctgaaaagagcaaaaatgagtaaaaaaagcactggcgagagggctcagtcacgaaagc 485
Query: 480 acttgccacaaaagcatgggaatccaagctccatccatagaaccctctttagagaagaac 539
|||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 484 acttgccacaaaagcatgggaatctgagctccacccatagaaccctctttagagaagaac 425
Query: 540 ctgggtggttctggagggttctagggctcactggccttagctaacaagcaaagttttagt 599
||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 424 ctgggtggttctggaggattctagggctcgctggccttagctaacaagcaaagttttagt 365
Query: 600 ctaataagaaactttctcaaaaaacaagacagcc 633
||||||||||||||||||||||||||||||||||
Sbjct: 364 ctaataagaaactttctcaaaaaacaagacagcc 331
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
