Query= MSMg01no491_g02.b1 MSMg01no491_g02.b1 CHROMAT_FILE:
MSMg01no491_g02.b1 PHD_FILE: MSMg01no491_g02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:17 2005
(540 letters)
>mm_chr5_104029372_104030311
Length = 940
Score = 741 bits (383), Expect = 0.0
Identities = 386/387 (99%)
Strand = Plus / Minus
Query: 4 ggaattcacgacattatctccatacagtgagtggcaagcattggtcatatcctggcaatc 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 ggaattcacgacattatttccatacagtgagtggcaagcattggtcatatcctggcaatc 328
Query: 64 ccctcccatcctcaccctgcaccggaaactcctccctatcccccagtaatgaatagtctc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccctcccatcctcaccctgcaccggaaactcctccctatcccccagtaatgaatagtctc 268
Query: 124 aagacttttccttgtatttccacacgtaggagagaacttgtctgtctctgtttgaaaggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagacttttccttgtatttccacacgtaggagagaacttgtctgtctctgtttgaaaggg 208
Query: 184 gcgtctccaggtacatccacccttctgacagtggcagatttcagtcttgatagctgaatg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gcgtctccaggtacatccacccttctgacagtggcagatttcagtcttgatagctgaatg 148
Query: 244 ataatcctctgtataagtacttaacaaaatccatggatctgctgaggggcacgagggcta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ataatcctctgtataagtacttaacaaaatccatggatctgctgaggggcacgagggcta 88
Query: 304 gttctgcagcacagccattctgactctcaagagctacagtaaacaccagtgtgcaggcat 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 gttctgcagcacagccattctgactctcaagagctacagtaaacaccagtgtgcaggcat 28
Query: 364 ttcttttggtggtatgcagagtggtat 390
|||||||||||||||||||||||||||
Sbjct: 27 ttcttttggtggtatgcagagtggtat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no491_g02.g1 MSMg01no491_g02.g1 CHROMAT_FILE:
MSMg01no491_g02.g1 PHD_FILE: MSMg01no491_g02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:15:17 2005
(460 letters)
>mm_chr5_103870274_103871133
Length = 860
Score = 797 bits (412), Expect = 0.0
Identities = 448/460 (97%), Gaps = 1/460 (0%)
Strand = Plus / Plus
Query: 1 tatgtatatatatttgacatttattggaggataatagtgataggaatgattccagatggc 60
|||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 tatgtatatatacttgacatttattggaggataatagtgataggaatgattcaagatggc 260
Query: 61 tggtcaatatccctcccttccatatcactgaagtaaacaccgggttttgtataaagatca 120
|||||| ||||||||||||| ||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 tggtcactatccctcccttctatatcactgaagtaaacactgggttttgtataaagatca 320
Query: 121 ggatagtcctcacacacaagatctctcaagtgtccatgtatcagggacttggattctagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggatagtcctcacacacaagatctctcaagtgtccatgtatcagggacttggattctagg 380
Query: 181 atttctctattgtcggtcttcctcaaggccagccattcttctcatgcctgtgcattcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttctctattgtcggtcttcctcaaggccagccattcttctcatgcctgtgcattcagt 440
Query: 241 gtctctgtgttttttctgtgaatgttcttttcattggcaagaattgtataataaaaaaaa 300
||||||||| | | |||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 441 gtctctgtgctgtctctgtgaatgttcttttcattggcaagaattgtaaaa-aaaaaaaa 499
Query: 301 aaagaaaaagaaaaaagaaaaaatccttcttagagaaactgtgaggaaggaaaatcacgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aaagaaaaagaaaaaagaaaaaatccttcttagagaaactgtgaggaaggaaaatcacgt 559
Query: 361 tgtaattgactttagcggcacaaacttccagacattcttcttcatagcattaacattcct 420
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tgtaattgactttggcggcacaaacttccagacattcttcttcatagcattaacattcct 619
Query: 421 tagctttaatactattcctttcaaatgtgccttttaaaca 460
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 620 tagccttaatactattcctttcaaatgtgccttttaaaca 659
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|