TCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCCCAAAAATCTTTCTACAGAGTGCTTCTCTTTTTGGTCTTGGTTTCAT
ATTTGGTAACCTCATTGAGACTCGTGGCCTTAAAACTACAAATATACCCA
CAGCTCCAAAATTTTGACCTTCATATTAATACATATGATGTTGGTAAGAT
TGGACATTAAATGATTGAACTATGAAAATACACATGTGCTACTGAGCAGT
CTGGAAAAGAGGCATCCTTTCTCTTTTGTACTGGTGAAAATGTCTGTTAG
TTTATAATAAAAATCAAATTATCTGTCTTTAAAATGGAAAAGAAAAATCC
TTATTCAGGACTGAATCATCCTTTTTATATTTAATAGCTTGTAAGCTACA
TTGCTTAATCTGGTTTTTCAACTTTTCACTTTTTGAGTACTGAATACATA
AGAATATTAAGCATTGTGTAGCTGTCAAAAATGAATGAATAAAAATATTG
TCATTAATATCCACATTATTATAATTTTTCATGCTTGATTTCTTGTTCAT
TATTTGCATTCTATCTAGTATTATCTGAACCGATCTTACCATTTATTTTA
TTTTTAACTGTAATTATATATGAGTTAAAAATCAAAATTTCACATGCTTA
AGGTATACATGAGAAAGTCTCTACTATTATTACATAAATTCTCATATTTA
TCACNAACAATAGTTAATGCTCACTCTCATTTG

NCCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTTTTCAATCGATTCTAAAGAAGCC
TTTAATTTCTGTTTTTACCCATTTTTCATCCATTTCATTTCATTGAGTTT
TTAGGCTTTACTATTGCTGATATTCAGCTTTAATACATGGTGGTATGAAA
GGATACAGGATCTTATTACAGTCTTTTGCATTTGCTGACCCTCATTTTGT
TTCTGTGTATGACATCAATTTTGGAAAAAGTTTCATGAGGTGATGAGAAG
GTATATTCTGTTATGCATGGGTGAAATCTCCCACTATCTGTATGTGAATG
TGTGATTTGAGCTGTATCGTGTTTCTCTTATAAACTTGAGTGACCTTGTG
CTTGGGGCTCAGGCATTAAGAATTTGCAATGTCTGCTTGGTAGATTTTTC
ATGGTGAGTATGTACTGTTATTTTCTTATTTTTTTTTTTCTGATTAGTTT
TGATTTGAAGTGGAGAGATTTGAAAAAATGTGGATGGATTTCATACTACT
AATATAACACTACACACTAGAAAGCTCTAGAACAAAAATGAAGGCAAAAT
TATACCCATGAGAAGACAAGAAACAATAAAATTCAGGCCTTAAATTCATT
AAGGTAGAAACAAACAAGCAAGCAAGCAAGCAAGCAAGCAAAAAACAATG
TAAAGAGTCAATTAAACAAAAAGTTGGTTCTT

Query= MSMg01no492_c23.b1 MSMg01no492_c23.b1 CHROMAT_FILE:
MSMg01no492_c23.b1 PHD_FILE: MSMg01no492_c23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:20 2005
         (607 letters)



>mm_chr5_63535644_63536648
          Length = 1005

 Score = 1118 bits (578), Expect = 0.0
 Identities = 597/604 (98%), Gaps = 2/604 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattcccaaaaatctttctacagagtgcttctctttttggtcttggtttcatatttgg 63
           ||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 204 ggaattcccaacaatctttctacagagtgcttctcttttcggtcttggtttcatatttgg 263

                                                                       
Query: 64  taacctcattgagactcgtggccttaaaactacaaatatacccacagctccaaaattttg 123
           ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 264 taacctcattgagactcatggccttaaaactacaaatatacccatagctccaaaattttg 323

                                                                       
Query: 124 accttcatattaatacatatgatgttggtaagattggacattaaatgattgaactatgaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 accttcatattaatacatatgatgttggtaagattggacattaaatgattgaactatgaa 383

                                                                       
Query: 184 aatacacatgtgctactgagcagtctggaaaagaggcatcctttctcttttgtactggtg 243
           |||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatacac--gtgctactgagcagtctggaaaagaggcatcctttctcttttgtactggtg 441

                                                                       
Query: 244 aaaatgtctgttagtttataataaaaatcaaattatctgtctttaaaatggaaaagaaaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaaatgtctgttagtttataataaaaatcaaattatctgtctttaaaatggaaaagaaaa 501

                                                                       
Query: 304 atccttattcaggactgaatcatcctttttatatttaatagcttgtaagctacattgctt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atccttattcaggactgaatcatcctttttatatttaatagcttgtaagctacattgctt 561

                                                                       
Query: 364 aatctggtttttcaacttttcactttttgagtactgaatacataagaatattaagcattg 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aatctggtttttcaacttttcactttttgagtactgaatacataagaatattaagcattg 621

                                                                       
Query: 424 tgtagctgtcaaaaatgaatgaataaaaatattgtcattaatatccacattattataatt 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 622 tgtagctgtcaaaaatgaatgaataaaaatattgtcattaatatccacattattataagt 681

                                                                       
Query: 484 tttcatgcttgatttcttgttcattatttgcattctatctagtattatctgaaccgatct 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tttcatgcttgatttcttgttcattatttgcattctatctagtattatctgaaccgatct 741

                                                                       
Query: 544 taccatttattttatttttaactgtaattatatatgagttaaaaatcaaaatttcacatg 603
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 taccatttattttatttttaactgtaattatatatgagttaaaaatcaaaatttcacatg 801

               
Query: 604 ctta 607
           ||||
Sbjct: 802 ctta 805


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1005
Length adjustment: 10
Effective length of query: 597
Effective length of database: 995
Effective search space:   594015
Effective search space used:   594015
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)