ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCACTTGTTACCCAACGATATTTCAGTCACGTGCTTAAATATTCAACTA
ACCAATTATTCTTTACTCTCCAGCCTTAGAACACAAAGATCAAACTAAAC
CAGTTAGCTTACACACTATACTTCAATAAGAATGGCGCTTACTACTATAA
ATTATTTTTAAATTGTACAATTGTGGCTTAAAGTAGTAGCAGACATGTAA
AAACCTCTTATCTCAAGCCCTAAGCTTATTTGCCTACATTCATTCCACAA
TGACAAACATCAAATTTTAATTCATGCTAACACTCCACAACTGCATTTCA
ATTATTGTGTTACATAGAACTGCTTTCTTAAGGTCCTTTTAAATTAATTT
AGCTAATAGACACCAGTTACTTTCCTATTATTGTGAGAAGACACCAAGAC
CAAGGCAACTTTTTTGGAGGTTTGTTTTCAGTTTCAGAGGGTGAGTCCTT
GAACAGGGAGGATGGCAGCAGGAAAGGTACTGAAGCAGTAGCTCAAATCT
TACCTTGCTATCACTTGGAAGCTGGGGAGACAGAAACAGACAATGGCCCA
CCCACCCTATTGACACATCTCCAAGAAGACTCCTTGGAGGAGTCCTTCCC
AAACAGTTCAACTGGGAACCAAGCGCTCAAATATTTGATCCCATGGAAGC
CATTTTCATTCAAACTAAAGCTGGTTAGTAAGATCCTATGATGTA

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTCAGCTCCTCCTGTACCATGCCTGCC
TGGATGTTGCCATGTTCCTGCCTTGATGATAATGGACTGAACCTCTGAAC
CTACAAGCCAGCCCCAAATAAATGTTGTCCTTCATAAGACGTGCCTTGAT
CATGGTGTCTGTCTTAGTCAGGGTTTCTATTCCTGCACAAGCATCATGAC
CAAGAAGCAGTTGGGGAGGAAAGGGTTTATTCTGCTTACACTTCCATACT
GCTGTTCATCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAA
GCAGGAGCTGATGCAGAGGCCATGGAGGGATGTTCTTTACTGGCTTGCCT
CACCTGGCTTGCTCAGCCTGCTTTCTTATAGAACCCAAGACTACCAGCCC
AGAGATGGTCCCACCCACAAGGGGCCTTTCTCCTTGATCACTAATTGAGA
AAATGCCTTAGAGTTGGATCTCATGGAGGCATTTCCTCAACTGAAGCTCC
TTTCTCTGTTTTAACCCCAGCTGTGTCAAGTTGACACAAAACTAGCCAGT
ACAGTGTCTCTTCATGGCAGTAAAACCCTAACTAAGACAAGAGACCACAA
GCAACATGGCACCAAATGGCCATGGTTGAAAGCCAATATATTCACAGATA
GGCCAGGTGTGGCTGTGCACATCTTTAATTCTTACATAAAGGAGAAAGAG
GC

Query= MSMg01no493_i20.b1 MSMg01no493_i20.b1 CHROMAT_FILE:
MSMg01no493_i20.b1 PHD_FILE: MSMg01no493_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:08 2005
         (645 letters)



>mm_chr5_52566914_52567958
          Length = 1045

 Score = 1239 bits (641), Expect = 0.0
 Identities = 644/645 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacgatatttcagtcacgtgcttaaatattcaactaaccaattattctttactctccagc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacgatatttcagtcacgtgcttaaatattcaactaaccaattattctttactctccagc 260

                                                                       
Query: 61  cttagaacacaaagatcaaactaaaccagttagcttacacactatacttcaataagaatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttagaacacaaagatcaaactaaaccagttagcttacacactatacttcaataagaatg 320

                                                                       
Query: 121 gcgcttactactataaattatttttaaattgtacaattgtggcttaaagtagtagcagac 180
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcgcttactactataaattacttttaaattgtacaattgtggcttaaagtagtagcagac 380

                                                                       
Query: 181 atgtaaaaacctcttatctcaagccctaagcttatttgcctacattcattccacaatgac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtaaaaacctcttatctcaagccctaagcttatttgcctacattcattccacaatgac 440

                                                                       
Query: 241 aaacatcaaattttaattcatgctaacactccacaactgcatttcaattattgtgttaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaacatcaaattttaattcatgctaacactccacaactgcatttcaattattgtgttaca 500

                                                                       
Query: 301 tagaactgctttcttaaggtccttttaaattaatttagctaatagacaccagttactttc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tagaactgctttcttaaggtccttttaaattaatttagctaatagacaccagttactttc 560

                                                                       
Query: 361 ctattattgtgagaagacaccaagaccaaggcaacttttttggaggtttgttttcagttt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctattattgtgagaagacaccaagaccaaggcaacttttttggaggtttgttttcagttt 620

                                                                       
Query: 421 cagagggtgagtccttgaacagggaggatggcagcaggaaaggtactgaagcagtagctc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cagagggtgagtccttgaacagggaggatggcagcaggaaaggtactgaagcagtagctc 680

                                                                       
Query: 481 aaatcttaccttgctatcacttggaagctggggagacagaaacagacaatggcccaccca 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aaatcttaccttgctatcacttggaagctggggagacagaaacagacaatggcccaccca 740

                                                                       
Query: 541 ccctattgacacatctccaagaagactccttggaggagtccttcccaaacagttcaactg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccctattgacacatctccaagaagactccttggaggagtccttcccaaacagttcaactg 800

                                                        
Query: 601 ggaaccaagcgctcaaatatttgatcccatggaagccattttcat 645
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggaaccaagcgctcaaatatttgatcccatggaagccattttcat 845


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space:   657225
Effective search space used:   657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)