Query= MSMg01no496_m06.b1 MSMg01no496_m06.b1 CHROMAT_FILE:
MSMg01no496_m06.b1 PHD_FILE: MSMg01no496_m06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:13 2005
(327 letters)
>mm_chr5_80527659_80528383
Length = 725
Score = 540 bits (279), Expect = e-158
Identities = 315/329 (95%), Gaps = 6/329 (1%)
Strand = Plus / Plus
Query: 1 tattaatataatttatcatagaaatatgtatcagaagaaaaaagtataacactattacat 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tattaatataatttatcatagaaatatgtatcagaagacaaaagtataacactattacat 260
Query: 61 ctaaaaacaaagacctgcttacttcagcagcatatacactaaaatgtaaacaatacagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctaaaaacaaagacctgcttacttcagcagcatatacactaaaatgtaaacaatacagag 320
Query: 121 aatgtttgtgtggctgctgcacaaggttgacacatgaatttggaatgtactccatatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgtttgtgtggctgctgcacaaggttgacacatgaatttggaatgtactccatatttt 380
Query: 181 tatgaaaagttcacgtgcgca--cacacacgcacacacacaaatgtgtgctaaaaaagca 238
|||||||||||| |||||| ||||||| |||||||||| |||||||||||||||||
Sbjct: 381 tatgaaaagttc--gtgcgcgtgcacacac--acacacacaactgtgtgctaaaaaagca 436
Query: 239 atatgtgcatattattatgtgtctttataaagaaattagaatggtgggagttgagagagg 298
||||||||||| | |||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 437 atatgtgcatagcactatgtgcctttataaagaaattagaatggtggtagttgagagagg 496
Query: 299 aaattatggtatggatgtaatatgtgaga 327
|||||||||||||||||||||||||||||
Sbjct: 497 aaattatggtatggatgtaatatgtgaga 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 725
Length adjustment: 9
Effective length of query: 318
Effective length of database: 716
Effective search space: 227688
Effective search space used: 227688
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no496_m06.g1 MSMg01no496_m06.g1 CHROMAT_FILE:
MSMg01no496_m06.g1 PHD_FILE: MSMg01no496_m06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:22:13 2005
(239 letters)
>mm_chr5_80579509_80580147
Length = 639
Score = 462 bits (239), Expect = e-135
Identities = 239/239 (100%)
Strand = Plus / Minus
Query: 1 agaataatgaaaatgtgagttattaatacaatagttttgacattgtagaaataataatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agaataatgaaaatgtgagttattaatacaatagttttgacattgtagaaataataatca 380
Query: 61 tatataaacatttcctctagaaaataagtagtttaattttattagcaaaggaagttcttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 tatataaacatttcctctagaaaataagtagtttaattttattagcaaaggaagttcttc 320
Query: 121 attttttattaaaataattgtgtcactcttgattgtaatgcacataaaaatagttttatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 attttttattaaaataattgtgtcactcttgattgtaatgcacataaaaatagttttatg 260
Query: 181 tcatgaggcaaaataggaattagaagtctattataaagagtctctgaacattatcacct 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcatgaggcaaaataggaattagaagtctattataaagagtctctgaacattatcacct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
