CGTATCACTCTTTTCAGACCGGATTCGTATTTACGATGTCATGTTGACCT
GACTACCTGGAGTCGCTCTCTTCAGTTGTCCCCCCCTAANAATACTTTTC
TACTTGACAAGCCCCNTTTGGAACTTTNNNCCCGTTTGTGTATTATCTCG
ACAGTGAAGCATGTCGNNTTGCGCTGAGGGGNNNNNNNNNCTCGAATTTT
CTTCGGNCCGGGGNATTTCGTACGATGGCGGGGNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTTNNNGNNNGGGGGGGGGGGGGGGGGGGGGGGGN
NNNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGG
GGGNNNNCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGGGGGGGCGGGGGGGGGGA
AACTANNNNNNNNNNNNNNNNNNNNAAANANGGGGGGGTGNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTNGTGTGGGGGG
G

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXAAATCCATTTGACGATGAAATGCAGACTGTTGGGCTGTTTC
CTACACACTCATGAACAGGAAGCAGGAGTCTCCCAAACAAGGGATAATTT
AGACTAGAAAGATTGATCACTTCAGTTCTTCCTTGGTTTGTGTTATGTAT
GACTCAGAGATTAATGATCCTAACTACCTGAAGTTAATGGAAACAAAACT
TCTTATCTATAAAGTATTTATAAATATGGATTGTATTGTCAACATTTTAG
AATTTGGATGTATTGAATTAAAGTTCTCTACATGAATTACTAAGGATCCT
TTTTGGACACTAGAAAAACAAAAGAAAAAACAACAATCACACTAATGGGT
GTCTTGCCTTGAGGAGCAACGGGTGGAACATTTTGAGATAATGTTTGTCT
TGTTTTAAGATTGTTATTATATAACATAAAATTTCATGCCATCCAAAGCT
CTTCCAGAGTTTTCTTTGTATTCCAGAGTAAAATAATTCCATATGATCAA
GTTTGTGTTGAATTTTTAGTGACAATCGAGTAAGAAGTTGGAAACATTTT
TGCTTATATAGTTTTGTTTTTACTGATCACTTAATATTAAAGAATCCCTT
TAAGACTATCTACAAAGACATACAGTGAAAAGAANAGAGTAAAATTGTTA
AAGACATGAAAGTGGAAATAAAATTAATA

Query= MSMg01no499_e03.g1 MSMg01no499_e03.g1 CHROMAT_FILE:
MSMg01no499_e03.g1 PHD_FILE: MSMg01no499_e03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:25:36 2005
         (663 letters)



>mm_chr5_82419414_82420478
          Length = 1065

 Score = 1253 bits (648), Expect = 0.0
 Identities = 660/665 (99%), Gaps = 2/665 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   aaatccatttgacgatgaaatgcagactgttgggctgtttcctacacactcatgaacagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aaatccatttgacgatgaaatgcagactgttgggctgtttcctacacactcatgaacagg 726

                                                                       
Query: 61  aagcaggagtctcccaaacaagggataatttagactagaaagattgatcacttcagttct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 aagcaggagtctcccaaacaagggataatttagactagaaagattgatcacttcagttct 666

                                                                       
Query: 121 tccttggtttgtgttatgtatgactcagagattaatgatcctaactacctgaagttaatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tccttggtttgtgttatgtatgactcagagattaatgatcctaactacctgaagttaatg 606

                                                                       
Query: 181 gaaacaaaacttcttatctataaagtatttataaatatggattgtattgtcaacatttta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 605 gaaacaaaacttcttatctataaagtatttataaatatggattgtattgccaacatttta 546

                                                                       
Query: 241 gaatttggatgtattgaattaaagttctctacatgaattactaaggatcctttttggaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 gaatttggatgtattgaattaaagttctctacatgaattactaaggatcctttttggaca 486

                                                                       
Query: 301 ctagaaaaacaaaagaaaaaacaacaatcacactaatgggtgtcttgccttgaggagcaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ctagaaaaacaaaagaaaaaacaacaatcacactaatgggtgtcttgccttgaggagcaa 426

                                                                       
Query: 361 cgggtggaacattttgagataatgtttgtcttgttttaagattgttattatataaca--t 418
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |
Sbjct: 425 cgggtggaacattttgagataatgtttgtcttgttttaagattgttattatataacagat 366

                                                                       
Query: 419 aaaatttcatgccatccaaagctcttccagagttttctttgtattccagagtaaaataat 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aaaatttcatgccatccaaagctcttccagagttttctttgtattccagagtaaaataat 306

                                                                       
Query: 479 tccatatgatcaagtttgtgttgaatttttagtgacaatcgagtaagaagttggaaacat 538
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 305 tccatatgatcaagtttgtgttgaatttttagtgacaattgagtaagaagttggaaacat 246

                                                                       
Query: 539 ttttgcttatatagttttgtttttactgatcacttaatattaaagaatccctttaagact 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttttgcttatatagttttgtttttactgatcacttaatattaaagaatccctttaagact 186

                                                                       
Query: 599 atctacaaagacatacagtgaaaagaanagagtaaaattgttaaagacatgaaagtggaa 658
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 185 atctacaaagacatacagtgaaaagaaaagagtaaaattgttaaagacatgaaagtggaa 126

                
Query: 659 ataaa 663
           |||||
Sbjct: 125 ataaa 121


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1065
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1055
Effective search space:   688915
Effective search space used:   688915
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)