Query= MSMg01no501_e21.b1 MSMg01no501_e21.b1 CHROMAT_FILE:
MSMg01no501_e21.b1 PHD_FILE: MSMg01no501_e21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:07 2005
(597 letters)
>mm_chr5_92745642_92746638
Length = 997
Score = 1073 bits (555), Expect = 0.0
Identities = 585/599 (97%), Gaps = 8/599 (1%)
Strand = Plus / Plus
Query: 3 ggaattccgaaatgcttcgagggcctgctctacatactagacctgtggtggtgaaggaca 62
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
Sbjct: 195 ggaattccgaaatgctaggagggcctgctctacatactagacctgtggtggtgaaggaga 254
Query: 63 caagagttctgaagccaagctatatatacacttgtgcacatgggtggagaccaagaaata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 caagagttctgaagccaagctatatatacacttgtgcacatgggtggagaccaagaaata 314
Query: 123 ttcacataattatttattaaagatttcttctttttaatcacatgctatgtgtctgtgtat 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ttcacataattatttattaaagatttcttctttttaatcacatgctatgtgtctgtgtat 374
Query: 183 ggatgtggatgtgcacactcgagtgcagcagccttcagaggcaagaagagggtgtgcatc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ggatgtggatgtgcacactcgagtgcagcagccttcagaggcaagaagagggtgtgcatc 434
Query: 243 tggggtaaaattagaacatggttacagcatgtgcatatctcatcttttgctaggttaggt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tggggtaaaattagaacatggttacagcatgtgcatatctcatcttttgctaggttaggt 494
Query: 303 tgctttatta-------tttttttttttc-gagacaggcctcgaactcagaaatctgctt 354
||||||| || |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 495 tgctttactactttttttttttttttttccgagacaggcctcgaactcagaaatctgctt 554
Query: 355 gcctctgcctcccaagtgctgggattaaaggcgtgcgccaccatgcccggcttgctttac 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gcctctgcctcccaagtgctgggattaaaggcgtgcgccaccatgcccggcttgctttac 614
Query: 415 tactattaattcactaggagtttctttcttttttcataattgccttatattttattttaa 474
|||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 615 tactattaattcactatgagtttctttcttttttcataattgccttattttttattttaa 674
Query: 475 gatataattatatcatttgctatggttttcttagtgggaatttgttaaagctacattcca 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gatataattatatcatttgctatggttttcttagtgggaatttgttaaagctacattcca 734
Query: 535 gttttgtgaaggaaaagataacactctcttacatactgcatcccttagtcaccatcagc 593
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 gttttgtgaaggaaaagataacactctcttacatactgcatcccttagtcaccatcagc 793
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_e21.g1 MSMg01no501_e21.g1 CHROMAT_FILE:
MSMg01no501_e21.g1 PHD_FILE: MSMg01no501_e21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:07 2005
(218 letters)
>mm_chr5_92871365_92871981
Length = 617
Score = 391 bits (202), Expect = e-113
Identities = 214/218 (98%), Gaps = 1/218 (0%)
Strand = Plus / Minus
Query: 1 cctgaaaactgaatttcaatatatttaaattttttaaaaaactgagatgtcacatacata 60
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 399 cctgaaaactgaatttcagtatatttaaatttttttaaaaactgagatgtcacatacata 340
Query: 61 ttagaagtaaaacattgctttaatatacaggcccaaattttcctctattgacacaaagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttagaagtaaaacattgctttaatatacaggcccaaattttcctctattgacacaaagca 280
Query: 121 atacacaatgtttcccttttttaaaaaaaaatttggtagtttttgagaccgggttggtgt 180
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 279 atacacaatgtttccctttttt-aaaaaaattttggtagtttttgagaccgggttggtgt 221
Query: 181 agtcttggctgttctggaagtcactatgtaaactaggc 218
||||||||||||||||||||||||||||||||||||||
Sbjct: 220 agtcttggctgttctggaagtcactatgtaaactaggc 183
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 617
Length adjustment: 9
Effective length of query: 209
Effective length of database: 608
Effective search space: 127072
Effective search space used: 127072
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
