Query= MSMg01no501_o17.b1 MSMg01no501_o17.b1 CHROMAT_FILE:
MSMg01no501_o17.b1 PHD_FILE: MSMg01no501_o17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:50 2005
(658 letters)
>mm_chr5_21134220_21135277
Length = 1058
Score = 1205 bits (623), Expect = 0.0
Identities = 647/655 (98%)
Strand = Plus / Plus
Query: 4 ctagggacttctataaacattggcacaacctgatcttttgtcttctttgatcctgatact 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ctagggacttctataaacattggcacaacctgatcttttgtcttctttgatcctgatact 263
Query: 64 ggccatgaaatttactctctcctcatcagtgtttctcaaacatgttagcatatgtacagc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ggccatgaaatttactctctcctcatcagtgtttctcaaacatgttagcatatgtacagc 323
Query: 124 aaggtttctttcaatcaaaatgacattgaaagcaaacttgctctagagagaaaagatgga 183
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaggtttctttcgatcaaaatgacattgaaagcaaacttgctctagagagaaaagatgga 383
Query: 184 aatggaggacccagaatcctatctcctacacctcattcctaatccctgagattgtctcca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatggaggacccagaatcctatctcctacacctcattcctaatccctgagattgtctcca 443
Query: 244 aacattttttagagcatagcttacagatacctgcactccttagtagatcgaagctctgtg 303
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aacatctccaagagcatagcttacagatacctgcactccttagtagatcgaagctctgtg 503
Query: 304 gctgatagagtgttcttacttagacaccataatgcatatcaatccctatcagatgcatgg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gctgatagagtgttcttacttagacaccataatgcatatcaatccctatcagatgcatgg 563
Query: 364 ggcccatgtgccagggcctccaggtaagcccagacttggcagaaccctctacgcagccca 423
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggcccatgtgccagggcctccaagtaagcccagacttggcagaaccctctacgcagcccg 623
Query: 424 ctacatgggtttctctgttgcagaacactgaggacccaaggctaacccataacctatcct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ctacatgggtttctctgttgcagaacactgaggacccaaggctaacccataacctatcct 683
Query: 484 gtgttcctgaggttcagaacccactttgaatattcagttacaattttcaatgtctgtctt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtgttcctgaggttcagaacccactttgaatattcagttacaattttcaatgtctgtctt 743
Query: 544 agttagggttttatcattgtgaacagacaccaggaccaaggcaagtcttgttaaaagaaa 603
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 744 agttagggttttatcattgtgaagagacaccaggaccaaggcaagtcttgttaaaagaaa 803
Query: 604 acatttaattagggcaggcttatagtttcagaggtttagtccattatcatcatgg 658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 acatttaattagggcaggcttatagtttcagaggtttagtccattatcatcatgg 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no501_o17.g1 MSMg01no501_o17.g1 CHROMAT_FILE:
MSMg01no501_o17.g1 PHD_FILE: MSMg01no501_o17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:50 2005
(626 letters)
>mm_chr5_21191257_21192282
Length = 1026
Score = 866 bits (448), Expect = 0.0
Identities = 476/490 (97%), Gaps = 9/490 (1%)
Strand = Plus / Minus
Query: 1 ctttccagcagcaccccgtttaagcatcttcattgttctatggttgcccacagtgtagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ctttccagcagcaccccgtttaagcatcttcattgttctatggttgcccacagtgtagca 431
Query: 61 aaccttcctgacatggcttttctagtcttgcatggcctcacttcacgagactgccaagtg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 aaccttcctgacatggcttttctagtcttgcatggcctcacttcacgagactgccaagta 371
Query: 121 ttgtttcccaaacctaactgtgatgtagctcttcctatgtgatctgtttatataggaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ttgtttcccaaacctaactgtgatgtagctcttcctatgtgatctgtttatataggaatg 311
Query: 181 ccagctatctaaactcccaaatctgatctcataaacgaactgaattttaatggctagtca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ccagctatctaaactcccaaatctgatctcataaacgaactgaattttaatggctagtca 251
Query: 241 ctgtcttttcctttgtagaggcctcagtctagacttaac---tttttttttttttttggt 297
|||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 250 ctgtctttgcctttgtagaggcctcagtctagacttaacttttttttttttttttttggt 191
Query: 298 tttttgagacagggtatctctgtgtagccctggctgtcctggaactcactctgtagacca 357
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 tttttgagacagggtttctctgtgtagccctggctgtcctggaactcactctgtagacca 131
Query: 358 ggctggcctcgaactcagaaatccgcctgcctct------cgagtgctgggaataaaggc 411
|||||||||||||||||||||||||||||||||| |||||||||||| |||| ||
Sbjct: 130 ggctggcctcgaactcagaaatccgcctgcctctgcctcccgagtgctgggattaaaagc 71
Query: 412 gtgcgccaccacgcccagctcttagacttaacttttaagacataaaaagtgagtctgtga 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 gtgcgccaccacgcccagctcttagacttaacttttaagacataaaaagtgagtctgtga 11
Query: 472 gaactcacag 481
||||||||||
Sbjct: 10 gaactcacag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
