Query= MSMg01no501_p20.b1 MSMg01no501_p20.b1 CHROMAT_FILE:
MSMg01no501_p20.b1 PHD_FILE: MSMg01no501_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:55 2005
(246 letters)
>mm_chr5_117318664_117319308
Length = 645
Score = 437 bits (226), Expect = e-127
Identities = 238/242 (98%), Gaps = 1/242 (0%)
Strand = Plus / Minus
Query: 5 ccagcccagagattagtttgactttccgagatgggcagatggaggctcagagcaacagga 64
|||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ccagtccagagattaatttgactttccgagatgggcagatggaggctcagagcaacagga 386
Query: 65 caatgtccctttcatgcaggtagaataaaaccttcccttagcctccctcccgaccgcaga 124
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caatgtccccttcatgcaggtagaataaaaccttcccttagcctccctcccgaccgcaga 326
Query: 125 tttcccagggagctgcttccagactgacgcgggctttccctttggctcttggtgtgacag 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 325 tttcccagggagctgcttccagactgacgcgggctttccctttggctcttggtg-gacag 267
Query: 185 ggggctccacgcctcgtcctgagcttcacctgtctgatgctgattgagataaagtctctc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ggggctccacgcctcgtcctgagcttcacctgtctgatgctgattgagataaagtctctc 207
Query: 245 tg 246
||
Sbjct: 206 tg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 645
Length adjustment: 9
Effective length of query: 237
Effective length of database: 636
Effective search space: 150732
Effective search space used: 150732
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no501_p20.g1 MSMg01no501_p20.g1 CHROMAT_FILE:
MSMg01no501_p20.g1 PHD_FILE: MSMg01no501_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:28:55 2005
(233 letters)
>mm_chr5_117156489_117157121
Length = 633
Score = 443 bits (229), Expect = e-129
Identities = 232/233 (99%)
Strand = Plus / Plus
Query: 1 actgacccaagacagcaggacaaggtcgtgttgggggagaaactccagctgtaagtggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgacccaagacagcaggacaaggtcgtgttgggggagaaactccagctgtaagtggaa 260
Query: 61 attcactctcccctttcctgcccctcttcagcaagaatataagcacttgtaaaacacacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attcactctcccctttcctgcccctcttcagcaagaatataagcacttgtaaaacacacg 320
Query: 121 caggagagagctgaactcataaacggctaattctctccctgcgttgcttacccctaacgt 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 caggagagagctgaactcataaacggctaattctctccctgcgttgctttcccctaacgt 380
Query: 181 ggcccccgagtcagcagaaccgttatctgcttaatctgatttgatggcgtggt 233
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcccccgagtcagcagaaccgttatctgcttaatctgatttgatggcgtggt 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
