NTTTTTTTTTNNTTCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTC
TAGGATCCGCGGAATTCTCTCCTGTCTGTCTCTCAGCTCACTTATGGGAG
CAAGCTGTTACCATGCCTAGCTTTTCATGCTCTCTGAGGCTTTGAACTAA
CACTCTCCAAGCAAACACTTTACCTACTGAGCCATATCTCTCATCTCTAA
ACTTGGACACCTTCTTCCAGAAAGAGAAAAGATATACTCAGCAGGCAGAC
AGACTTCTTCCTATAGACTTGAGAGTTAGATGTCCCTCCCCTGTCTATCT
ATGCATGGGATGCCTAAGGCCCCACTCCCTGATGCCCACAGGTTGGTACT
GCAAAACCTATTTTAAAATTGTAGGTGGAAAACTGGGGAGGACATTCATG
CCTAGGCAGATCTGGAGGTCCTGAGGTCAAGGTTGCAATCTGGGTTTGTC
ATCCTTCAGCAGCATTGGGAGAGATTGTTGGTGTATTGCAAAATTAGAGA
TGCTGTGTGGCGGGCTCCTGTCATCATATTTCATGGCCCCCTTTCTCTGC
TTTGGTGATCAATGATGTTGTGAGGAGACCCCATTTCTCAGCTTGTTTTT
GTTGTTGGTTTTGATTACCAGTTCAAAGATCAAAAACAGCCCCAGCCTGG
TCTGCTTTCTTGTAACCTGCTCCTTCTCCCATATTCCCCCAAATAAATAA
ATATCATGAGATTCGCTTTTTCTTCTAAGTCAAAGGT

TTTTTTTNNCCGATGCTAGGGGTXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGAACTTTTCAGCTGG
GGAACGAGAGTACCAGTGAATACAGCTTTACGAGGTAAGTCTGATCTTGA
ACTTTCTAAGGAAATTCAAGACAGTCTATCAGAAGTAAAGTGGAATATGT
TTGGTCTTGAATTTTTTCTGGTGTTAGGAGCCCTTTTGTTCCTTTTCACA
TGTTATCAAGTGATTAAGATAGGGCTGAAAATTCTAGAGGAAATTCAGGA
CAAGCTATCAGAAGTAAAGTGGGGAGAGAGAGTAGGAACAAAGAGGAAAT
ATGGTACACAAAATAAGTATACAGGCCTTTCCAAGGGTCTTGAACCCGAG
AAAAAGTTAAGGTTAGGTAGGAATACCTGGAGAGAGATTAGAAGAAAAAG
AGGAAAAAGGGAAAAGAAGAAAGATCAATTAGCGGAGGTCTCTAGGAAAA
GGAGCCTGTGCTCATCGCTGGATGGGCTCGGGGAGCCAGCTCTTGGTAGC
TCTGAATCAGATGATGAATTCTCCTCTGAAGAAACAGACTGGGAGGAAGA
AGCAGCTCATTATGAGAAAAAAGGGTACCAGCCAGGTAAAGTGCTAGCTA
ATCAGTTAAGGAAGCCAAAAGCGGCTGGCGAAAGCCAGTTTGCTGATTGG
GCTCAGGGCAGTCGGCTTCAAGGTCCGGCCTATGCGGAN

Query= MSMg01no503_a20.b1 MSMg01no503_a20.b1 CHROMAT_FILE:
MSMg01no503_a20.b1 PHD_FILE: MSMg01no503_a20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:30:14 2005
         (555 letters)



>mm_chr5_128298321_128299275
          Length = 955

 Score = 1035 bits (535), Expect = 0.0
 Identities = 550/555 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttctctcctgtctgtctctcagctcacttatgggagcaagctgttaccatgcctagcttt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 ttctctcctgtctgtctctcagctcacttatgggagcaagctgttaccatgcctagcttt 822

                                                                       
Query: 61  tcatgctctctgaggctttgaactaacactctccaagcaaacactttacctactgagcca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 tcatgctctctgaggctttgaactaacactctccaagcaaacactttacctactgagcca 762

                                                                       
Query: 121 tatctctcatctctaaacttggacaccttcttccagaaagagaaaagatatactcagcag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 tatctctcatctctaaacttggacaccttcttccagaaagagaaaagatatactcagcag 702

                                                                       
Query: 181 gcagacagacttcttcctatagacttgagagttagatgtccctcccctgtctatctatgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 gcagacagacttcttcctatagacttgagagttagatgtccctcccctgtctatctatgc 642

                                                                       
Query: 241 atgggatgcctaaggccccactccctgatgcccacaggttggtactgcaaaacctatttt 300
           |||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 641 atgggatgcctaaggccccactccctgacggccacaggttggtactgcaaaacctatttt 582

                                                                       
Query: 301 aaaattgtaggtggaaaactggggaggacattcatgcctaggcagatctggaggtcctga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 aaaattgtaggtggaaaactggggaggacattcatgcctaggcagatctggaggtcctga 522

                                                                       
Query: 361 ggtcaaggttgcaatctgggtttgtcatccttcagcagcattgggagagattgttggtgt 420
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 521 ggtcaaggttgcaatctgggtttgttatccttcagcagcattgggagagattgttggtgt 462

                                                                       
Query: 421 attgcaaaattagagatgctgtgtggcgggctcctgtcatcatatttcatggcccccttt 480
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 agggcaaaattagagatgctgtgtggcgggctcctgtcatcatatttcatggcccccttt 402

                                                                       
Query: 481 ctctgctttggtgatcaatgatgttgtgaggagaccccatttctcagcttgtttttgttg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 ctctgctttggtgatcaatgatgttgtgaggagaccccatttctcagcttgtttttgttg 342

                          
Query: 541 ttggttttgattacc 555
           |||||||||||||||
Sbjct: 341 ttggttttgattacc 327


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 955
Length adjustment: 10
Effective length of query: 545
Effective length of database: 945
Effective search space:   515025
Effective search space used:   515025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)